U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Il23r interleukin 23 receptor [ Mus musculus (house mouse) ]

    Gene ID: 209590, updated on 17-Dec-2024

    Summary

    Official Symbol
    Il23rprovided by MGI
    Official Full Name
    interleukin 23 receptorprovided by MGI
    Primary source
    MGI:MGI:2181693
    See related
    Ensembl:ENSMUSG00000049093 AllianceGenome:MGI:2181693
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    IL-23R
    Summary
    Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to contribute to interleukin-12 receptor binding activity; interleukin-23 binding activity; and interleukin-23 receptor activity. Predicted to be involved in several processes, including positive regulation of defense response to virus by host; regulation of cytokine production; and response to type II interferon. Predicted to act upstream of or within cell surface receptor signaling pathway via JAK-STAT and leukocyte mediated immunity. Predicted to be located in plasma membrane. Predicted to be part of interleukin-23 receptor complex. Predicted to be active in external side of plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); bone disease (multiple); inflammatory bowel disease (multiple); pulmonary hypertension; and systemic scleroderma. Orthologous to human IL23R (interleukin 23 receptor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Il23r in Genome Data Viewer
    Location:
    6 C1; 6 30.85 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (67399906..67468838, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (67422932..67491855, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16185 Neighboring gene STARR-seq mESC enhancer starr_16186 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:67483136-67483367 Neighboring gene predicted gene, 44083 Neighboring gene ribosomal protein S7 pseudogene Neighboring gene immunoglobulin kappa chain variable 2-137 Neighboring gene tumor-associated calcium signal transducer 2 Neighboring gene immunoglobulin kappa chain complex

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (13)  1 citation

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cytokine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to interleukin-12 receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables interleukin-12 receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to interleukin-12 receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    contributes_to interleukin-23 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to interleukin-23 binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables interleukin-23 binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    contributes_to interleukin-23 receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables interleukin-23 receptor activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables peptide hormone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prolactin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell surface receptor signaling pathway via JAK-STAT ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in cytokine-mediated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within cytokine-mediated signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in interleukin-23-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within leukocyte mediated immunity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in negative regulation of interleukin-10 production IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of interleukin-10 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of T-helper 1 type immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of T-helper 1 type immune response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell population proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of defense response to virus by host IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of defense response to virus by host ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of interleukin-12 production IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of interleukin-12 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of type II interferon production IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of type II interferon production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to lipopolysaccharide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to type II interferon IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to type II interferon ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of interleukin-23 receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of interleukin-23 receptor complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of interleukin-23 receptor complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    interleukin-23 receptor
    Names
    IL-23 receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_144548.2NP_653131.3  interleukin-23 receptor precursor

      Status: VALIDATED

      Source sequence(s)
      AC124758, AC159129
      Consensus CDS
      CCDS39503.2
      UniProtKB/Swiss-Prot
      Q8K4B4
      UniProtKB/TrEMBL
      G5E8U4
      Related
      ENSMUSP00000113342.3, ENSMUST00000118364.2
      Conserved Domains (1) summary
      smart00060
      Location:125203
      FN3; Fibronectin type 3 domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      67399906..67468838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)