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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001122832.1 → NP_001116304.1 epidermal growth factor receptor substrate 15-like 1 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks several 3' exons compared to variant 1, and its 3' terminal exon extends past a splice site that is used in variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AA217470, AK036728, BY270130
- Consensus CDS
-
CCDS85560.1
- UniProtKB/TrEMBL
-
A0A1D5RLS1
- Related
- ENSMUSP00000148484.2, ENSMUST00000212590.3
- Conserved Domains (4) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- cd00052
Location:131 → 196
- EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
- pfam07926
Location:396 → 523
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- cl23720
Location:400 → 517
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
NM_001289859.1 → NP_001276788.1 epidermal growth factor receptor substrate 15-like 1 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site and lacks two consecutive exons in the 3' coding region, compared to variant 1. It encodes isoform c, which is shorter than isoform a.
- Source sequence(s)
-
AK146781, AK152602, BB855263, CD774936
- Consensus CDS
-
CCDS85561.1
- UniProtKB/Swiss-Prot
-
Q60902
- Related
- ENSMUSP00000148468.2, ENSMUST00000212121.2
- Conserved Domains (4) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- cd00052
Location:131 → 196
- EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
- pfam07926
Location:396 → 523
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- cl23720
Location:400 → 517
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
NM_007944.3 → NP_031970.2 epidermal growth factor receptor substrate 15-like 1 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AK146781, BY270130, CD774936
- Consensus CDS
-
CCDS52597.1
- UniProtKB/Swiss-Prot
- Q3U7L9, Q3UIS9, Q60902, Q8CB60, Q8CB70, Q91WH8
- Related
- ENSMUSP00000129739.2, ENSMUST00000163643.3
- Conserved Domains (4) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- cd00052
Location:131 → 196
- EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
- pfam07926
Location:396 → 523
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- cl02488
Location:383 → 564
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
73094834..73175410 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017312560.3 → XP_017168049.1 epidermal growth factor receptor substrate 15-like 1 isoform X6
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 565
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509550.4 → XP_006509613.1 epidermal growth factor receptor substrate 15-like 1 isoform X7
- Conserved Domains (2) summary
-
- COG1196
Location:97 → 278
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:30 → 76
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509548.5 → XP_006509611.1 epidermal growth factor receptor substrate 15-like 1 isoform X5
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 564
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509547.5 → XP_006509610.1 epidermal growth factor receptor substrate 15-like 1 isoform X4
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 564
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509544.5 → XP_006509607.1 epidermal growth factor receptor substrate 15-like 1 isoform X1
- UniProtKB/TrEMBL
-
A0AAQ4VMU6
- Related
- ENSMUSP00000159997.1, ENSMUST00000249899.1
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 564
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509546.5 → XP_006509609.1 epidermal growth factor receptor substrate 15-like 1 isoform X3
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 565
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
-
XM_006509545.5 → XP_006509608.1 epidermal growth factor receptor substrate 15-like 1 isoform X2
- Conserved Domains (3) summary
-
- smart00027
Location:266 → 362
- EH; Eps15 homology domain
- COG1196
Location:383 → 565
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl27812
Location:13 → 103
- EF-hand_4; Cytoskeletal-regulatory complex EF hand
RNA
-
XR_004934761.1 RNA Sequence
-
XR_379029.5 RNA Sequence
-
XR_379032.5 RNA Sequence
-
XR_001778398.3 RNA Sequence
-
XR_003947228.2 RNA Sequence
-
XR_379030.5 RNA Sequence
-
XR_004934766.1 RNA Sequence
-
XR_004934765.1 RNA Sequence
-
XR_004934767.1 RNA Sequence
-
XR_004934763.1 RNA Sequence
-
XR_001778400.3 RNA Sequence
-
XR_004934764.1 RNA Sequence
-
XR_003947230.2 RNA Sequence
-
XR_379031.5 RNA Sequence
- Related
-
ENSMUST00000212950.2
-
XR_004934762.1 RNA Sequence