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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001170981.3 → NP_001164452.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2
See identical proteins and their annotated locations for NP_001164452.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses a different splice site in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1. Variants 2, 3 and 13 encode the same isoform (2).
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88662.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Related
- ENSMUSP00000154757.2, ENSMUST00000227242.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001170982.3 → NP_001164453.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2
See identical proteins and their annotated locations for NP_001164453.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 5' UTR and uses a different splice site in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1. Variants 2, 3 and 13 encode the same isoform (2).
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88662.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Related
- ENSMUSP00000154737.2, ENSMUST00000227536.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001170983.3 → NP_001164454.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3
See identical proteins and their annotated locations for NP_001164454.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses two different splice sites in the coding region, compared to variant 1. The resulting protein (isoform 3) is shorter when it is compared to isoform 1. Variants 4, 14, 15 and 16 encode the same isoform (3).
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88661.1
- UniProtKB/Swiss-Prot
-
Q9Z204
- Related
- ENSMUSP00000154166.2, ENSMUST00000228748.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001170984.3 → NP_001164455.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4
See identical proteins and their annotated locations for NP_001164455.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses two different splice sites in the coding region, compared to variant 1. The resulting protein (isoform 4) is shorter when it is compared to isoform 1. Variants 5, 17 and 18 encode the same isoform (4).
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88660.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Related
- ENSMUSP00000154238.2, ENSMUST00000227458.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360172.2 → NP_001347101.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS36917.1
- UniProtKB/Swiss-Prot
- Q3TLB5, Q501Q3, Q8C2G5, Q99KE2, Q9CQT3, Q9CY83, Q9Z204
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360173.2 → NP_001347102.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS36917.1
- UniProtKB/Swiss-Prot
- Q3TLB5, Q501Q3, Q8C2G5, Q99KE2, Q9CQT3, Q9CY83, Q9Z204
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360174.2 → NP_001347103.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88659.1
- Related
- ENSMUSP00000154212.2, ENSMUST00000228198.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360175.2 → NP_001347104.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88659.1
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360176.2 → NP_001347105.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360177.2 → NP_001347106.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360178.2 → NP_001347107.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360179.2 → NP_001347108.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88662.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360180.2 → NP_001347109.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88661.1
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360181.2 → NP_001347110.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88661.1
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360182.2 → NP_001347111.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88661.1
- Related
- ENSMUSP00000154619.2, ENSMUST00000228232.2
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360183.2 → NP_001347112.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88660.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001360184.2 → NP_001347113.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS88660.1
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
-
NM_001424475.1 → NP_001411404.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424476.1 → NP_001411405.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424477.1 → NP_001411406.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC157572
-
NM_001424478.1 → NP_001411407.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/Swiss-Prot
- Q3TLB5, Q501Q3, Q8C2G5, Q99KE2, Q9CQT3, Q9CY83, Q9Z204
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424479.1 → NP_001411408.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424480.1 → NP_001411409.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424481.1 → NP_001411410.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC157572
- UniProtKB/TrEMBL
-
Q3U6P5
-
NM_001424482.1 → NP_001411411.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC157572
-
NM_016884.5 → NP_058580.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1
See identical proteins and their annotated locations for NP_058580.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest protein (isoform 1). Variants 1, 6 and 7 encode the same isoform (1).
- Source sequence(s)
-
AC157572
- Consensus CDS
-
CCDS36917.1
- UniProtKB/Swiss-Prot
- Q3TLB5, Q501Q3, Q8C2G5, Q99KE2, Q9CQT3, Q9CY83, Q9Z204
- UniProtKB/TrEMBL
-
Q3U6P5
- Related
- ENSMUSP00000107237.5, ENSMUST00000111610.12
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
52310834..52341462 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036158467.1 → XP_036014360.1 heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
- UniProtKB/Swiss-Prot
- Q3TLB5, Q501Q3, Q8C2G5, Q99KE2, Q9CQT3, Q9CY83, Q9Z204
- UniProtKB/TrEMBL
-
Q3U6P5
- Conserved Domains (1) summary
-
- cd12603
Location:10 → 93
- RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)