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    Creb3l3 cAMP responsive element binding protein 3-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 208677, updated on 27-Nov-2024

    Summary

    Official Symbol
    Creb3l3provided by MGI
    Official Full Name
    cAMP responsive element binding protein 3-like 3provided by MGI
    Primary source
    MGI:MGI:2384786
    See related
    Ensembl:ENSMUSG00000035041 AllianceGenome:MGI:2384786
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CREB-H; D10Bur1e
    Summary
    Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and protein dimerization activity. Involved in positive regulation of transcription by RNA polymerase II and response to endoplasmic reticulum stress. Located in membrane and nucleus. Is expressed in several structures, including extraembryonic visceral endoderm; genitourinary system; gut; liver; and septum transversum. Orthologous to human CREB3L3 (cAMP responsive element binding protein 3 like 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in duodenum adult (RPKM 141.6), small intestine adult (RPKM 102.5) and 6 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Creb3l3 in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80920163..80934706, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81084329..81098872, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha Neighboring gene STARR-positive B cell enhancer ABC_E1808 Neighboring gene STARR-positive B cell enhancer ABC_E462 Neighboring gene thimet oligopeptidase 1 Neighboring gene microRNA 5615-1 Neighboring gene microRNA 5615-2 Neighboring gene mitogen-activated protein kinase kinase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum membrane TAS
    Traceable Author Statement
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cyclic AMP-responsive element-binding protein 3-like protein 3
    Names
    cAMP-responsive element-binding protein 3-like protein 3
    transcription factor CREB-H

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001382818.1NP_001369747.1  cyclic AMP-responsive element-binding protein 3-like protein 3

      Status: VALIDATED

      Source sequence(s)
      AC152500
      UniProtKB/Swiss-Prot
      Q8BWS0, Q91XE9
      Conserved Domains (1) summary
      cd14689
      Location:240300
      bZIP_CREB3; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain
    2. NM_145365.3NP_663340.1  cyclic AMP-responsive element-binding protein 3-like protein 3

      See identical proteins and their annotated locations for NP_663340.1

      Status: VALIDATED

      Source sequence(s)
      AK077258
      Consensus CDS
      CCDS24043.1
      UniProtKB/Swiss-Prot
      Q8BWS0, Q91XE9
      Related
      ENSMUSP00000112836.2, ENSMUST00000117422.2
      Conserved Domains (1) summary
      cd14689
      Location:240300
      bZIP_CREB3; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      80920163..80934706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)