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    LINC00567 long intergenic non-protein coding RNA 567 [ Homo sapiens (human) ]

    Gene ID: 283486, updated on 17-Sep-2024

    Summary

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    Official Symbol
    LINC00567provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 567provided by HGNC
    Primary source
    HGNC:HGNC:43711
    See related
    Ensembl:ENSG00000259831 AllianceGenome:HGNC:43711
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LINC00567 in Genome Data Viewer
    Location:
    13q34
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (110809676..110813084, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (110039872..110043275, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (111462023..111465431, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein L21 pseudogene 107 Neighboring gene uncharacterized LOC107984613 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111445577-111446077 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111446189-111447086 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111450737-111451238 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:111464033-111464574 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:111464575-111465116 Neighboring gene uncharacterized LOC105370362 Neighboring gene NANOG hESC enhancer GRCh37_chr13:111468190-111468713 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5518 Neighboring gene uncharacterized LOC105370363

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135280.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL157875
      Related
      ENST00000569854.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      110809676..110813084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      110039872..110043275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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