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    Fam124b family with sequence similarity 124, member B [ Mus musculus (house mouse) ]

    Gene ID: 241128, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam124bprovided by MGI
    Official Full Name
    family with sequence similarity 124, member Bprovided by MGI
    Primary source
    MGI:MGI:3026880
    See related
    Ensembl:ENSMUSG00000043230 AllianceGenome:MGI:3026880
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A830043J08Rik
    Summary
    Predicted to be located in mitochondrion. Predicted to be active in nucleoplasm. Is expressed in several structures, including axial skeleton; heart; lung; nervous system; and sensory organ. Orthologous to human FAM124B (family with sequence similarity 124 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 2.3), lung adult (RPKM 0.9) and 2 other tissues See more
    Orthologs
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    Genomic context

    See Fam124b in Genome Data Viewer
    Location:
    1 C5; 1 41.19 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (80176416..80192050, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (80198699..80214205, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33970 Neighboring gene STARR-seq mESC enhancer starr_01453 Neighboring gene predicted gene, 23934 Neighboring gene STARR-seq mESC enhancer starr_01454 Neighboring gene RIKEN cDNA 2310015K22 gene Neighboring gene STARR-seq mESC enhancer starr_01455 Neighboring gene predicted gene, 57487 Neighboring gene STARR-seq mESC enhancer starr_01456 Neighboring gene predicted gene, 34098 Neighboring gene cullin 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173425.3NP_775601.1  protein FAM124B

      See identical proteins and their annotated locations for NP_775601.1

      Status: VALIDATED

      Source sequence(s)
      AK043867, AV276683
      Consensus CDS
      CCDS15093.1
      UniProtKB/Swiss-Prot
      Q8BLQ0
      UniProtKB/TrEMBL
      B9EKF5
      Related
      ENSMUSP00000052208.2, ENSMUST00000058748.2
      Conserved Domains (1) summary
      pfam15067
      Location:10244
      FAM124; FAM124 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      80176416..80192050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320658.3XP_017176147.1  protein FAM124B isoform X1

      Conserved Domains (1) summary
      pfam15067
      Location:10244
      FAM124; FAM124 family