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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_023392.1 RefSeqGene
- Range
-
5100..85383
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001280541.2 → NP_001267470.1 intraflagellar transport protein 122 homolog isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 5' coding region and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. It encodes isoform 5, which is shorter than isoform 1.
- Source sequence(s)
-
AF244931, AK315103, BC028353, BF941125, DB516647
- Consensus CDS
-
CCDS63770.1
- UniProtKB/TrEMBL
-
A0A8I5KP73
- Related
- ENSP00000425536.1, ENST00000507564.5
- Conserved Domains (3) summary
-
- COG2319
Location:4 → 340
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:49 → 341
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001280545.2 → NP_001267474.1 intraflagellar transport protein 122 homolog isoform 6
See identical proteins and their annotated locations for NP_001267474.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks an alternate exon and contains an alternate exon in the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform 6, which is shorter than isoform 1.
- Source sequence(s)
-
AF244930, AK096891, AK124140, BF941125, DB099554, DB516647
- UniProtKB/TrEMBL
-
B4DST2
- Conserved Domains (3) summary
-
- COG2319
Location:2 → 200
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:133 → 167
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:134 → 200
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001280546.2 → NP_001267475.1 intraflagellar transport protein 122 homolog isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks three alternate exons in the 5' coding region and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform 7, which is shorter than isoform 1.
- Source sequence(s)
-
AK096891, AK124140, AK298526, AK299903, BF941125, DB099554, DB516647
- UniProtKB/TrEMBL
-
B4DST2
- Related
- ENSP00000509186.1, ENST00000693233.1
- Conserved Domains (3) summary
-
- COG2319
Location:24 → 141
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:30 → 64
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:24 → 142
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001410808.1 → NP_001397737.1 intraflagellar transport protein 122 homolog isoform 8
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93372.1
- UniProtKB/TrEMBL
- A0A8I5KSG5, A0A8I5QKV2
- Related
- ENSP00000509878.1, ENST00000692242.1
-
NM_001410809.1 → NP_001397738.1 intraflagellar transport protein 122 homolog isoform 9
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93374.1
- UniProtKB/TrEMBL
- A0A8I5KVC7, A0A8I5QKV2
- Related
- ENSP00000509806.1, ENST00000693129.1
-
NM_001410810.1 → NP_001397739.1 intraflagellar transport protein 122 homolog isoform 10
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93375.1
- UniProtKB/TrEMBL
- A0A8I5KSV0, A0A8I5KWK4
- Related
- ENSP00000510425.1, ENST00000689332.1
-
NM_001410811.1 → NP_001397740.1 intraflagellar transport protein 122 homolog isoform 11
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93376.1
- UniProtKB/TrEMBL
- A0A8I5KSV0, A0A8I5QKX8
- Related
- ENSP00000509982.1, ENST00000689801.1
-
NM_001410813.1 → NP_001397742.1 intraflagellar transport protein 122 homolog isoform 12
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93377.1
- UniProtKB/TrEMBL
- A0A8I5KSV0, A0A8I5KTL4
- Related
- ENSP00000510741.1, ENST00000691583.1
-
NM_001410815.1 → NP_001397744.1 intraflagellar transport protein 122 homolog isoform 13
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93379.1
- UniProtKB/TrEMBL
- A0A8I5KT04, A0A8I5QL25
- Related
- ENSP00000509216.1, ENST00000693588.1
-
NM_001410817.1 → NP_001397746.1 intraflagellar transport protein 122 homolog isoform 14
Status: REVIEWED
- Source sequence(s)
-
AC080007, AL449212
- Consensus CDS
-
CCDS93380.1
- UniProtKB/TrEMBL
- A0A8I5QL25, A0A8J9A3C6
- Related
- ENSP00000422179.2, ENST00000504021.6
-
NM_018262.4 → NP_060732.2 intraflagellar transport protein 122 homolog isoform 3
See identical proteins and their annotated locations for NP_060732.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks two alternate in-frame exons in the 5' coding region, compared to variant 1. It encodes isoform 3, which lacks two internal segments and is shorter than isoform 1.
- Source sequence(s)
-
AK001759, BC028353, BF941125, DB516647
- Consensus CDS
-
CCDS3059.1
- UniProtKB/TrEMBL
-
A0A8I5KSV0
- Related
- ENSP00000323973.3, ENST00000347300.6
- Conserved Domains (3) summary
-
- COG2319
Location:15 → 289
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:49 → 291
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_052985.4 → NP_443711.2 intraflagellar transport protein 122 homolog isoform 1
See identical proteins and their annotated locations for NP_443711.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF244931, AK298526, BF941125, DB516647
- Consensus CDS
-
CCDS3060.1
- UniProtKB/TrEMBL
-
A0A8I5KP73
- Related
- ENSP00000296266.3, ENST00000296266.7
- Conserved Domains (3) summary
-
- COG2319
Location:15 → 240
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:12 → 241
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_052989.3 → NP_443715.1 intraflagellar transport protein 122 homolog isoform 2
See identical proteins and their annotated locations for NP_443715.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. It encodes isoform 2, which lacks an internal segment and is shorter that isoform 1.
- Source sequence(s)
-
AF244931, AF302154, BF941125, DB099554, DB516647
- Consensus CDS
-
CCDS3061.1
- UniProtKB/Swiss-Prot
- B3KW53, B4DEY9, B4DPW7, E7EQF4, E9PDG2, E9PDX2, G3XAB1, H7C3C0, Q53G36, Q8TC06, Q9BTB9, Q9BTY4, Q9HAT9, Q9HBG5, Q9HBG6, Q9NV68, Q9UF80
- UniProtKB/TrEMBL
-
A0A8I5QKV2
- Related
- ENSP00000324005.4, ENST00000348417.7
- Conserved Domains (3) summary
-
- COG2319
Location:4 → 348
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:15 → 190
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_052990.3 → NP_443716.1 intraflagellar transport protein 122 homolog isoform 4
See identical proteins and their annotated locations for NP_443716.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks four alternate exons in the 5' coding region and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. It encodes isoform 4, which lacks two in-frame segments and is shorter, compared to isoform 1.
- Source sequence(s)
-
AK298526, BC003045, BF941125, DB099554, DB516647
- Consensus CDS
-
CCDS3062.1
- UniProtKB/TrEMBL
-
A0A8I5QL25
- Related
- ENSP00000324165.3, ENST00000349441.6
- Conserved Domains (3) summary
-
- COG2319
Location:15 → 237
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl26002
Location:599 → 807
- TPR_11; TPR repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
129440224..129520507
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006713691.4 → XP_006713754.1 intraflagellar transport protein 122 homolog isoform X1
- UniProtKB/TrEMBL
- A0A8I5KXT5, A0A8I5QKV2
- Related
- ENSP00000509225.1, ENST00000687377.1
- Conserved Domains (3) summary
-
- COG2319
Location:4 → 348
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:15 → 190
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047448546.1 → XP_047304502.1 intraflagellar transport protein 122 homolog isoform X2
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_047448547.1 → XP_047304503.1 intraflagellar transport protein 122 homolog isoform X3
- UniProtKB/TrEMBL
- A0A8I5KUU2, A0A8I5QKV2
- Related
- ENSP00000508904.1, ENST00000688020.1
-
XM_047448548.1 → XP_047304504.1 intraflagellar transport protein 122 homolog isoform X4
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_047448549.1 → XP_047304505.1 intraflagellar transport protein 122 homolog isoform X5
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_017006834.3 → XP_016862323.1 intraflagellar transport protein 122 homolog isoform X6
- UniProtKB/TrEMBL
- A0A8I5QKR8, A0A8I5QL25
- Related
- ENSP00000509297.1, ENST00000690663.1
-
XM_047448552.1 → XP_047304508.1 intraflagellar transport protein 122 homolog isoform X7
- UniProtKB/TrEMBL
-
B4DST2
-
XM_011512972.4 → XP_011511274.1 intraflagellar transport protein 122 homolog isoform X8
- UniProtKB/TrEMBL
-
A0A8I5KNX7
- Related
- ENSP00000508811.1, ENST00000690723.1
- Conserved Domains (3) summary
-
- COG2319
Location:4 → 348
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:15 → 190
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_006713695.4 → XP_006713758.1 intraflagellar transport protein 122 homolog isoform X9
- UniProtKB/TrEMBL
-
A0A8I5KS91
- Related
- ENSP00000508642.1, ENST00000685282.1
- Conserved Domains (3) summary
-
- COG2319
Location:4 → 348
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:15 → 51
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:15 → 190
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047448553.1 → XP_047304509.1 intraflagellar transport protein 122 homolog isoform X10
- UniProtKB/TrEMBL
-
A0A8I5KRP5
- Related
- ENSP00000509155.1, ENST00000685447.1
-
XM_047448551.1 → XP_047304507.1 intraflagellar transport protein 122 homolog isoform X7
- UniProtKB/TrEMBL
-
B4DST2
-
XM_047448554.1 → XP_047304510.1 intraflagellar transport protein 122 homolog isoform X11
- UniProtKB/TrEMBL
-
Q9NUW6
- Related
- ENSP00000508740.1, ENST00000688527.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
132185050..132264949
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347220.1 → XP_054203195.1 intraflagellar transport protein 122 homolog isoform X1
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_054347221.1 → XP_054203196.1 intraflagellar transport protein 122 homolog isoform X2
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_054347222.1 → XP_054203197.1 intraflagellar transport protein 122 homolog isoform X3
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_054347223.1 → XP_054203198.1 intraflagellar transport protein 122 homolog isoform X4
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_054347224.1 → XP_054203199.1 intraflagellar transport protein 122 homolog isoform X5
- UniProtKB/TrEMBL
-
A0A8I5QKV2
-
XM_054347225.1 → XP_054203200.1 intraflagellar transport protein 122 homolog isoform X6
- UniProtKB/TrEMBL
-
A0A8I5QL25
-
XM_054347227.1 → XP_054203202.1 intraflagellar transport protein 122 homolog isoform X7
- UniProtKB/TrEMBL
-
B4DST2
-
XM_054347228.1 → XP_054203203.1 intraflagellar transport protein 122 homolog isoform X8
- UniProtKB/TrEMBL
-
A0A8I5KNX7
-
XM_054347229.1 → XP_054203204.1 intraflagellar transport protein 122 homolog isoform X9
- UniProtKB/TrEMBL
-
A0A8I5KS91
-
XM_054347230.1 → XP_054203205.1 intraflagellar transport protein 122 homolog isoform X10
- UniProtKB/TrEMBL
-
A0A8I5KRP5
-
XM_054347226.1 → XP_054203201.1 intraflagellar transport protein 122 homolog isoform X7
- UniProtKB/TrEMBL
-
B4DST2
-
XM_054347231.1 → XP_054203206.1 intraflagellar transport protein 122 homolog isoform X11
- UniProtKB/TrEMBL
-
Q9NUW6