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    RSC9 Rsc9p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854912, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RSC9
    Official Full Name
    Rsc9p
    Primary source
    SGD:S000004596
    Locus tag
    YML127W
    See related
    AllianceGenome:SGD:S000004596; FungiDB:YML127W; VEuPathDB:YML127W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables DNA binding activity. Involved in DNA-templated transcription; nucleosome disassembly; and regulation of transcription by RNA polymerase II. Part of RSC-type complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See RSC9 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (17064..18809)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Cox14p Neighboring gene Msc1p Neighboring gene hydroxymethylglutaryl-CoA synthase Neighboring gene cytochrome-b5 reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes. Mas G, et al. EMBO J, 2009 Feb 18. PMID 19153600, Free PMC Article
    2. Control of Cdc28 CDK1 by a stress-induced lncRNA. Nadal-Ribelles M, et al. Mol Cell, 2014 Feb 20. PMID 24508389, Free PMC Article
    3. A yeast chemical genetics approach identifies the compound 3,4,5-trimethoxybenzyl isothiocyanate as a calcineurin inhibitor. Prescott TA, et al. FEBS Lett, 2014 Jan 31. PMID 24374339
    4. Activated RSC-nucleosome complex and persistently altered form of the nucleosome. Lorch Y, et al. Cell, 1998 Jul 10. PMID 9674424
    5. Structure of the RSC complex bound to the nucleosome. Ye Y, et al. Science, 2019 Nov 15. PMID 31672915, Free PMC Article

    See all (79) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chromatin remodeling IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in nucleosome disassembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in rRNA transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transcription elongation by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RSC-type complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of RSC-type complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Rsc9p
    NP_013579.1
    • Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      17064..18809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182490.1 → NP_013579.1  TPA: Rsc9p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013579.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W0F8, Q03124
      UniProtKB/TrEMBL
      A6ZLT8, B3LLD3, B5VP03, C7GVA8, C8ZE75, G2WJT0, N1NYX8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03124.1

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