U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Aldoart2 aldolase 1 A retrogene 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299052, updated on 27-Nov-2024

    Summary

    Official Symbol
    Aldoart2provided by RGD
    Official Full Name
    aldolase 1 A retrogene 2provided by RGD
    Primary source
    RGD:1359133
    See related
    EnsemblRapid:ENSRNOG00000030869 AllianceGenome:RGD:1359133
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Aldoal1; Aldoart1
    Summary
    Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be located in I band and M band. Predicted to be active in cytosol. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Aldoart2 in Genome Data Viewer
    Location:
    6q23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (78674945..78676635)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (72939821..72941511)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (76349362..76351052)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit alpha 6 Neighboring gene NFKB inhibitor alpha Neighboring gene Ral GTPase activating protein catalytic subunit alpha 1 Neighboring gene INSM transcriptional repressor 2 Neighboring gene high mobility group protein B1-like

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables fructose-bisphosphate aldolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in fructose 1,6-bisphosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glycolytic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in I band IEA
    Inferred from Electronic Annotation
    more info
     
    located_in M band IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    fructose-bisphosphate aldolase
    Names
    aldolase 1 A retrogene 1
    aldolase A-like 1
    NP_001013965.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013943.1NP_001013965.1  fructose-bisphosphate aldolase

      See identical proteins and their annotated locations for NP_001013965.1

      Status: VALIDATED

      Source sequence(s)
      BC079243
      UniProtKB/TrEMBL
      A0A8L2R123, A0A9K3Y7M7, F1LP06, Q6AY07
      Related
      ENSRNOP00000099974.1, ENSRNOT00000132466.1
      Conserved Domains (1) summary
      pfam00274
      Location:15364
      Glycolytic; Fructose-bisphosphate aldolase class-I

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      78674945..78676635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)