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    Ivl involucrin [ Mus musculus (house mouse) ]

    Gene ID: 16447, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ivlprovided by MGI
    Official Full Name
    involucrinprovided by MGI
    Primary source
    MGI:MGI:96626
    See related
    Ensembl:ENSMUSG00000049128 AllianceGenome:MGI:96626
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110019C06Rik
    Summary
    Acts upstream of or within regulation of antibacterial peptide production. Located in cornified envelope. Is expressed in alimentary system; genitourinary system; limb digit; skin; and thymus. Orthologous to human IVL (involucrin). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward bladder adult (RPKM 87.0) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ivl in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92478206..92481097, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92570899..92573790, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 1A Neighboring gene small proline-rich protein 4 Neighboring gene predicted gene, 35639 Neighboring gene sperm mitochondria-associated cysteine-rich protein Neighboring gene late cornified envelope 6A

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in keratinization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in keratinocyte differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in peptide cross-linking ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of antibacterial peptide production IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in response to UV-B ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cornified envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cornified envelope ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008412.3NP_032438.2  involucrin

      See identical proteins and their annotated locations for NP_032438.2

      Status: VALIDATED

      Source sequence(s)
      AA789977, AC125089, BY142984
      Consensus CDS
      CCDS17561.1
      UniProtKB/TrEMBL
      A7MCU8, G3X9D9
      Related
      ENSMUSP00000059780.5, ENSMUST00000053107.6
      Conserved Domains (2) summary
      pfam06994
      Location:240278
      Involucrin2
      pfam10583
      Location:167
      Involucrin_N; Involucrin of squamous epithelia N-terminus

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92478206..92481097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501046.1XP_006501109.1  involucrin isoform X1

      See identical proteins and their annotated locations for XP_006501109.1

      UniProtKB/TrEMBL
      A7MCU8, G3X9D9
      Conserved Domains (2) summary
      pfam06994
      Location:240278
      Involucrin2
      pfam10583
      Location:167
      Involucrin_N; Involucrin of squamous epithelia N-terminus
    2. XM_006501047.4XP_006501110.1  involucrin isoform X1

      See identical proteins and their annotated locations for XP_006501110.1

      UniProtKB/TrEMBL
      A7MCU8, G3X9D9
      Conserved Domains (2) summary
      pfam06994
      Location:240278
      Involucrin2
      pfam10583
      Location:167
      Involucrin_N; Involucrin of squamous epithelia N-terminus