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    E130102H24Rik RIKEN cDNA E130102H24 gene [ Mus musculus (house mouse) ]

    Gene ID: 77866, updated on 17-Aug-2024

    Summary

    Official Symbol
    E130102H24Rikprovided by MGI
    Official Full Name
    RIKEN cDNA E130102H24 geneprovided by MGI
    Primary source
    MGI:MGI:1925116
    See related
    Ensembl:ENSMUSG00000086782 AllianceGenome:MGI:1925116
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 7.9), bladder adult (RPKM 6.9) and 26 other tissues See more
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    Genomic context

    See E130102H24Rik in Genome Data Viewer
    Location:
    4 C6; 4 46.66 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (101203721..101213445, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (101346524..101356248, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr4:100965565-100965866 Neighboring gene STARR-seq mESC enhancer starr_10897 Neighboring gene predicted gene 12796 Neighboring gene STARR-seq mESC enhancer starr_10898 Neighboring gene predicted gene, 54243 Neighboring gene predicted gene, 57839 Neighboring gene STARR-seq mESC enhancer starr_10899 Neighboring gene RIKEN cDNA 0610043K17 gene Neighboring gene microRNA 101a Neighboring gene ribosomal protein L9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_10903 Neighboring gene adenylate kinase 4 Neighboring gene STARR-seq mESC enhancer starr_10910

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040708.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI853970, AK021368, AL645668
      Related
      ENSMUST00000144604.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      101203721..101213445 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)