U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SSN8 cyclin-dependent protein serine/threonine kinase regulator SSN8 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855706, updated on 9-Dec-2024

    Summary

    Official Symbol
    SSN8
    Official Full Name
    cyclin-dependent protein serine/threonine kinase regulator SSN8
    Primary source
    SGD:S000004970
    Locus tag
    YNL025C
    See related
    AllianceGenome:SGD:S000004970; FungiDB:YNL025C; VEuPathDB:YNL025C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    CNC1; GIG3; NUT9; RYE2; SRB11; UME3
    Summary
    Enables RNA polymerase II core promoter sequence-specific DNA binding activity and cyclin-dependent protein serine/threonine kinase regulator activity. Involved in cellular response to heat; meiotic cell cycle; and regulation of DNA-templated transcription. Part of mediator complex. Orthologous to human CCNC (cyclin C). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SSN8 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (584320..585291, complement)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene DNA-binding transcription factor CRZ1 Neighboring gene SAM complex subunit SAM50 Neighboring gene ncRNA Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Component Evidence Code Pubs
    part_of mediator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mediator complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cyclin-dependent protein serine/threonine kinase regulator SSN8
    NP_014373.3
    • Cyclin-like component of RNA polymerase II holoenzyme; involved in phosphorylation of RNAPII C-terminal domain; forms kinase-cyclin pair in RNAPII holoenzyme with Ssn3p; needed for entry into and execution of meiotic program; involved in glucose repression, telomere maintenance; degraded in response to nitrogen starvation, and also to oxidative stress, but in different cellular compartments, and with different cellular outcomes; 35% identical to human cyclin C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      584320..585291 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182864.3NP_014373.3  TPA: cyclin-dependent protein serine/threonine kinase regulator SSN8 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014373.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1F3, P47821
      UniProtKB/TrEMBL
      A6ZS52, B3LPR0, B5VR12, C7GWP3, C8ZFK2, G2WM77, N1P4K8
      Conserved Domains (1) summary
      COG5333
      Location:27323
      CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]