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    PF3D7_1110500 vacuolar protein sorting-associated protein 35, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810661, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1110500
    Gene description
    vacuolar protein sorting-associated protein 35, putative
    Locus tag
    PF3D7_1110500
    See related
    PlasmoDB:PF3D7_1110500; VEuPathDB:PF3D7_1110500
    Gene type
    protein coding
    RNA name
    vacuolar protein sorting-associated protein 35, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1110500 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Sequence:
    Chromosome: 11; NC_037282.1 (422057..425418)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene RNA-binding protein, putative Neighboring gene mitochondrial ribosomal protein L11 precursor, putative Neighboring gene actin-like protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Detection of retromer assembly in Plasmodium falciparum by immunosensing coupled to Surface Plasmon Resonance. Iqbal MS, et al. Biochim Biophys Acta Proteins Proteom, 2018 May-Jun. PMID 29654975
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within retrograde transport, endosome to Golgi ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    part_of retromer complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 35, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      422057..425418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347749.1 → XP_001347785.1  vacuolar protein sorting-associated protein 35, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347785.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UZB4, A0A024VEX8, A0A024W668, A0A024WQ20, A0A024X6Z4, A0A0L1I7L2, A0A0L7K9C0, Q8IIQ6, W4IH18, W4IRX2, W7FCK1, W7FX49, W7JLZ8, W7K475
      Conserved Domains (1) summary
      pfam03635
      Location:25 → 1006
      Vps35; Vacuolar protein sorting-associated protein 35
    Nucleotide Protein
    Heading Accession and Version

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