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    PF3D7_1111100 replication factor C subunit 5, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810666, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1111100
    Gene description
    replication factor C subunit 5, putative
    Locus tag
    PF3D7_1111100
    See related
    PlasmoDB:PF3D7_1111100; VEuPathDB:PF3D7_1111100
    Gene type
    protein coding
    RNA name
    replication factor C subunit 5, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1111100 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Sequence:
    Chromosome: 11; NC_037282.1 (437171..438220, complement)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene ES2 protein, putative Neighboring gene tRNA m5C-methyltransferase, putative Neighboring gene conserved protein, unknown function Neighboring gene protein transport protein BOS1, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmodium falciparum replication factor C subunit 1 is involved in genotoxic stress response. Sheriff O, et al. Cell Microbiol, 2021 Feb. PMID 33040440
    2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA binding HDA PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA replication ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within DNA strand elongation involved in DNA replication ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of DNA replication factor C complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    replication factor C subunit 5, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      437171..438220 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347754.1 → XP_001347790.1  replication factor C subunit 5, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347790.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UYB3, A0A024VEY5, A0A024W768, A0A024WQJ0, A0A024X653, A0A0L1I7L7, A0A0L7KAR5, A0A0L7LZ46, Q8IIQ1, W4IGW3, W4IRN7, W7F5E5, W7FNQ8, W7JM00, W7K479
      Conserved Domains (1) summary
      PRK12402
      Location:1 → 231
      PRK12402; replication factor C small subunit 2; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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