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    vps901 putative guanyl-nucleotide exchange factor Vps901 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540886, updated on 3-Dec-2024

    Summary

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    Official Symbol
    vps901
    Official Full Name
    putative guanyl-nucleotide exchange factor Vps901
    Primary source
    PomBase:SPBC4F6.10
    Locus tag
    SPOM_SPBC4F6.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    vps9a
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    Genomic context

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    See vps901 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (2707956..2711825)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene siderophore-Fe(3+) transporter Str1 Neighboring gene ncRNA Neighboring gene asparagine synthase Neighboring gene ncRNA Neighboring gene paxillin-like protein Pxl1 Neighboring gene WD repeat/BOP1NT protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coordinated regulation by two VPS9 domain-containing guanine nucleotide exchange factors in small GTPase Rab5 signaling pathways in fission yeast. Tsukamoto Y, et al. Biochem Biophys Res Commun, 2015 Mar 20. PMID 25686494
    2. CUE domain-containing protein Vps901 is required for vacuolar protein transport in Schizosaccharomyces pombe. Nakase M, et al. Biosci Biotechnol Biochem, 2012. PMID 22484924
    3. Fitness profiling links topoisomerase II regulation of centromeric integrity to doxorubicin resistance in fission yeast. Nguyen TT, et al. Sci Rep, 2015 Feb 11. PMID 25669599, Free PMC Article
    4. A genetic screen to discover pathways affecting cohesin function in Schizosaccharomyces pombe identifies chromatin effectors. Chen Z, et al. G3 (Bethesda), 2012 Oct. PMID 23050226, Free PMC Article
    5. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Deletion of both vps901 and vps902 genes completely abolished the mating process and responses to various stresses.
      Title: Coordinated regulation by two VPS9 domain-containing guanine nucleotide exchange factors in small GTPase Rab5 signaling pathways in fission yeast.
    2. The VPS9 domain of Vps901p is required for vacuolar protein trafficking in S. pombe.
      Title: CUE domain-containing protein Vps901 is required for vacuolar protein transport in Schizosaccharomyces pombe.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables small GTPase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endocytic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative guanyl-nucleotide exchange factor Vps901

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2707956..2711825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022027.3 → NP_596110.3  LOW QUALITY PROTEIN: putative guanyl-nucleotide exchange factor Vps901 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      D2CFN6, O74396
      UniProtKB/TrEMBL
      A0AAN2H6D9
    Nucleotide Protein
    Heading Accession and Version

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