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    pfl5 glycoprotein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540145, updated on 14-Nov-2024

    Summary

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    Official Symbol
    pfl5
    Official Full Name
    glycoprotein
    Primary source
    PomBase:SPBC1289.15
    Locus tag
    SPOM_SPBC1289.15
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPBC8E4.07c
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    Genomic context

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    See pfl5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (4421395..4425608)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cu(2+) amine oxidase-like protein Cao2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of hsp16 in response to nucleotide depletion is regulated via the spc1 MAPK pathway in Schizosaccharomyces pombe. Taricani L, et al. Nucleic Acids Res, 2001 Jul 15. PMID 11452028, Free PMC Article
    2. Deciphering the transcriptional-regulatory network of flocculation in Schizosaccharomyces pombe. Kwon EJ, et al. PLoS Genet, 2012. PMID 23236291, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables cell adhesion mediator activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in flocculation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in flocculation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm HDA PubMed 
    is_active_in external side of fungal-type cell wall ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4421395..4425608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023861.3 → NP_596840.1  glycoprotein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596840.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9URU4, Q9USQ3
      Conserved Domains (1) summary
      pfam10182
      Location:1131 → 1275
      Flo11; Flo11 domain
    Nucleotide Protein
    Heading Accession and Version

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