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    jnm1 dynactin complex subunit dynamitin [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538878, updated on 18-Sep-2024

    Summary

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    Official Symbol
    jnm1
    Official Full Name
    dynactin complex subunit dynamitin
    Primary source
    PomBase:SPCC11E10.03
    Locus tag
    SPOM_SPCC11E10.03
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    mug1
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    Genomic context

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    See jnm1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1456213..1457855)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene cystathionine beta-lyase Neighboring gene ncRNA Neighboring gene pig-K Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PPR-repeat protein ppr6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dynactin and Num1 cooperate to establish the cortical anchoring of cytoplasmic dynein in S. pombe. Fujita I, et al. J Cell Sci, 2015 Apr 15. PMID 25736293
    2. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
    3. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
    4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Dynein anchoring is established by cooperation of transient assembly of dynactin and function of Num1 at the cell cortex.
      Title: Dynactin and Num1 cooperate to establish the cortical anchoring of cytoplasmic dynein in S. pombe.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    contributes_to cytoskeletal protein-membrane anchor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dynein-driven meiotic oscillatory nuclear movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mitotic spindle organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in nuclear migration by microtubule mediated pushing forces IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    part_of dynactin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of dynactin complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynactin complex subunit dynamitin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1456213..1457855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023189.3 → NP_588199.1  dynactin complex subunit dynamitin [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588199.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9USP4
      Conserved Domains (1) summary
      pfam04912
      Location:269 → 350
      Dynamitin; Dynamitin
    Nucleotide Protein
    Heading Accession and Version

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