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    rib5 riboflavin synthase Rib5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539183, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rib5
    Official Full Name
    riboflavin synthase Rib5
    Primary source
    PomBase:SPCC1450.13c
    Locus tag
    SPOM_SPCC1450.13C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rib5 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1757320..1758303, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene serine/threonine protein kinase Cek1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene pig-F/3-ketosphinganine reductase fusion protein Neighboring gene ER protein folding oxidoreductin Ero1b Neighboring gene triacylglycerol lipase Ptl1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables riboflavin synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in riboflavin biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    riboflavin synthase Rib5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1757320..1758303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023302.3 → NP_588312.1  riboflavin synthase Rib5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588312.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7P0
      Conserved Domains (1) summary
      COG0307
      Location:1 → 207
      RibC; Riboflavin synthase alpha chain [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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