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    ckb1 CK2 family regulatory subunit Ckb1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542564, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ckb1
    Official Full Name
    CK2 family regulatory subunit Ckb1
    Primary source
    PomBase:SPAC1851.03
    Locus tag
    SPOM_SPAC1851.03
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ckb1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003424.3 (4502282..4505734)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene anaphase-promoting complex TPR lobe subcomplex subunit Apc3 Neighboring gene ncRNA Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase Slc1 Neighboring gene Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Ric1/Sat4 Neighboring gene ncRNA Neighboring gene GRIP domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Schizosaccharomyces pombe casein kinase II alpha and beta subunits: evolutionary conservation and positive role of the beta subunit. Roussou I, et al. Mol Cell Biol, 1994 Jan. PMID 8264625, Free PMC Article
    2. Casein kinase 2 regulates telomere protein complex formation through Rap1 phosphorylation. Inoue H, et al. Nucleic Acids Res, 2019 Jul 26. PMID 31131414, Free PMC Article
    3. Casein kinase 2 inhibits HomolD-directed transcription by Rrn7 in Schizosaccharomyces pombe. Moreira-Ramos S, et al. FEBS J, 2015 Feb. PMID 25410910
    4. Phosphorylation of Swi6/HP1 regulates transcriptional gene silencing at heterochromatin. Shimada A, et al. Genes Dev, 2009 Jan 1. PMID 19136623, Free PMC Article
    5. Crosstalk between casein kinase II and Ste20-related kinase Nak1. Cipak L, et al. Cell Cycle, 2013 Mar 15. PMID 23462181, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein kinase regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein serine/threonine kinase activator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    contributes_to protein serine/threonine kinase activator activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in positive regulation of pericentric heterochromatin formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of silent mating-type cassette heterochromatin formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase III IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in signal transduction IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of UTP-C complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitotic spindle pole body HDA PubMed 
    is_active_in nucleus HDA PubMed 
    part_of protein kinase CK2 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of protein kinase CK2 complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CK2 family regulatory subunit Ckb1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4502282..4505734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356169.2 → NP_001342935.1  CK2 family regulatory subunit Ckb1 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P40232, Q9US19
      Conserved Domains (1) summary
      COG5041
      Location:16 → 231
      SKB2; Casein kinase II, beta subunit [Signal transduction mechanisms / Cell division and chromosome partitioning / Transcription]
    Nucleotide Protein
    Heading Accession and Version

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