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    rps1101 40S ribosomal protein uS17 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543120, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rps1101
    Official Full Name
    40S ribosomal protein uS17
    Primary source
    PomBase:SPAC31G5.03
    Locus tag
    SPOM_SPAC31G5.03
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    rps11-1
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    Genomic context

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    See rps1101 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2992646..2993240)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene U2 snRNP-associated RNA-binding protein Sap49 Neighboring gene chaperone Rot1 Neighboring gene ncRNA Neighboring gene homoisocitrate dehydrogenase Lys12 Neighboring gene ribulose phosphate 3-epimerase Neighboring gene ncRNA Neighboring gene protein Rgg8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs. Lemieux C, et al. Nucleic Acids Res, 2009 Jun. PMID 19336419, Free PMC Article
    2. Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14. Keller C, et al. RNA, 2010 Jun. PMID 20403971, Free PMC Article
    3. Characterization of Mug33 reveals complementary roles for actin cable-dependent transport and exocyst regulators in fission yeast exocytosis. Snaith HA, et al. J Cell Sci, 2011 Jul 1. PMID 21652630, Free PMC Article
    4. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    5. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in ribosome biogenesis ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein uS17

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2992646..2993240
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019429.3 → NP_594003.1  40S ribosomal protein uS17 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594003.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14385, P0CT73, P0CT74, P79013
      Conserved Domains (3) summary
      COG0186
      Location:59 → 142
      RpsQ; Ribosomal protein S17 [Translation, ribosomal structure and biogenesis]
      PTZ00241
      Location:7 → 152
      PTZ00241; 40S ribosomal protein S11; Provisional
      pfam16205
      Location:8 → 68
      Ribosomal_S17_N; Ribosomal_S17 N-terminal
    Nucleotide Protein
    Heading Accession and Version

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