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    atd3 betaine-aldehyde dehydrogenase Atd3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539264, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atd3
    Official Full Name
    betaine-aldehyde dehydrogenase Atd3
    Primary source
    PomBase:SPCC550.10
    Locus tag
    SPOM_SPCC550.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    meu8
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    Genomic context

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    See atd3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1204499..1206695)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene peroxin Pex32 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Val Neighboring gene ncRNA Neighboring gene karyopherin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic controls of DNA damage avoidance in response to acetaldehyde in fission yeast. Noguchi C, et al. Cell Cycle, 2017 Jan 2. PMID 27687866, Free PMC Article
    2. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables betaine-aldehyde dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular detoxification of nitrogen compound IC
    Inferred by Curator
    more info
    		  
    involved_in glycine betaine biosynthetic process from choline IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    betaine-aldehyde dehydrogenase Atd3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1204499..1206695
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023093.3 → NP_588102.1  betaine-aldehyde dehydrogenase Atd3 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588102.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59808
      Conserved Domains (1) summary
      pfam00171
      Location:33 → 495
      Aldedh; Aldehyde dehydrogenase family
    Nucleotide Protein
    Heading Accession and Version

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