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    mga2 IPT/TIG ankyrin repeat-containing transcription regulator [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542701, updated on 18-Sep-2024

    Summary

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    Official Symbol
    mga2
    Official Full Name
    IPT/TIG ankyrin repeat-containing transcription regulator
    Primary source
    PomBase:SPAC26H5.05
    Locus tag
    SPOM_SPAC26H5.05
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See mga2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4125083..4128805)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Gid5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene shelterin complex subunit Pot1 Neighboring gene seven transmembrane receptor protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of mutants with increased variation in cell size at onset of mitosis in fission yeast. Scotchman E, et al. J Cell Sci, 2021 Feb 11. PMID 33419777, Free PMC Article
    2. Polo boxes form a single functional domain that mediates interactions with multiple proteins in fission yeast polo kinase. Reynolds N, et al. J Cell Sci, 2003 Apr 1. PMID 12615979
    3. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
    4. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
    5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables double-stranded DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transcription coregulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasmic side of endoplasmic reticulum membrane IC
    Inferred by Curator
    more info
    		  
    is_active_in fungal-type vacuole HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    IPT/TIG ankyrin repeat-containing transcription regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4125083..4128805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019881.3 → NP_594452.1  IPT/TIG ankyrin repeat-containing transcription regulator [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594452.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13987
      Conserved Domains (4) summary
      cd00102
      Location:658 → 741
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
      cd00204
      Location:853 → 938
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:862 → 911
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:861 → 892
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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