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    1700009J07Rik RIKEN cDNA 1700009J07 gene [ Mus musculus (house mouse) ]

    Gene ID: 75188, updated on 22-Oct-2024

    Summary

    Official Symbol
    1700009J07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700009J07 geneprovided by MGI
    Primary source
    MGI:MGI:1914938
    See related
    Ensembl:ENSMUSG00000096573 AllianceGenome:MGI:1914938
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930535B06Rik
    Expression
    Restricted expression toward testis adult (RPKM 209.6) See more
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    Genomic context

    See 1700009J07Rik in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (77729254..77731945)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (77893420..77896111)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene thrombospondin type laminin G domain and EAR repeats Neighboring gene keratin associated protein 10-31 Neighboring gene keratin associated protein 10-24 Neighboring gene predicted gene, 53590 Neighboring gene leucine rich repeat containing 3 Neighboring gene transient receptor potential cation channel, subfamily M, member 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015547.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK005796, AK006749
      Related
      ENSMUST00000185309.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      77729254..77731945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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