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    Kcnrg potassium channel regulator [ Mus musculus (house mouse) ]

    Gene ID: 328424, updated on 27-Nov-2024

    Summary

    Official Symbol
    Kcnrgprovided by MGI
    Official Full Name
    potassium channel regulatorprovided by MGI
    Primary source
    MGI:MGI:2685591
    See related
    Ensembl:ENSMUSG00000046168 AllianceGenome:MGI:2685591
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Clld4; Gm745; E030012H22Rik
    Summary
    Predicted to enable identical protein binding activity. Predicted to be involved in negative regulation of delayed rectifier potassium channel activity. Predicted to be active in endoplasmic reticulum. Orthologous to human KCNRG (potassium channel regulator). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in lung adult (RPKM 1.7), limb E14.5 (RPKM 1.3) and 23 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Kcnrg in Genome Data Viewer
    Location:
    14 D1; 14 33.16 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (61844905..61850282)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (61607457..61612833)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 7 Neighboring gene vomeronasal 1 receptor, pseudogene 136 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:62175814-62175923 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_36882 Neighboring gene STARR-seq mESC enhancer starr_36883 Neighboring gene tripartite motif-containing 13 Neighboring gene deleted in lymphocytic leukemia, 2 Neighboring gene microRNA 16-1 Neighboring gene microRNA 15a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    potassium channel regulatory protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039105.4NP_001034194.1  potassium channel regulatory protein isoform 1

      See identical proteins and their annotated locations for NP_001034194.1

      Status: VALIDATED

      Source sequence(s)
      AC154660
      Consensus CDS
      CCDS27187.1
      UniProtKB/Swiss-Prot
      B2RV87, B7ZWD9, Q2TUM3, Q6P8J6, Q8C6V1
      Related
      ENSMUSP00000055327.9, ENSMUST00000051184.10
      Conserved Domains (2) summary
      smart00225
      Location:7106
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cl02518
      Location:794
      BTB; BTB/POZ domain
    2. NM_206974.2NP_996857.1  potassium channel regulatory protein isoform 2

      See identical proteins and their annotated locations for NP_996857.1

      Status: VALIDATED

      Source sequence(s)
      AC154660
      Consensus CDS
      CCDS88684.1
      UniProtKB/Swiss-Prot
      Q2TUM3
      Related
      ENSMUSP00000153429.2, ENSMUST00000225582.2
      Conserved Domains (2) summary
      smart00225
      Location:7106
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cl02518
      Location:794
      BTB; BTB/POZ domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      61844905..61850282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)