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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001362644.2 → NP_001349573.1 GPI transamidase component PIG-T isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AL591478
- Consensus CDS
-
CCDS89578.1
- UniProtKB/TrEMBL
-
B7ZC19
- Related
- ENSMUSP00000112577.2, ENSMUST00000117066.8
- Conserved Domains (1) summary
-
- pfam04113
Location:36 → 419
- Gpi16; Gpi16 subunit, GPI transamidase component
-
NM_001362645.2 → NP_001349574.1 GPI transamidase component PIG-T isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AL591478
- Conserved Domains (1) summary
-
- pfam04113
Location:2 → 301
- Gpi16; Gpi16 subunit, GPI transamidase component
-
NM_001378795.1 → NP_001365724.1 GPI transamidase component PIG-T isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL591478
- Conserved Domains (1) summary
-
- pfam04113
Location:71 → 478
- Gpi16; Gpi16 subunit, GPI transamidase component
-
NM_133779.3 → NP_598540.2 GPI transamidase component PIG-T isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL591478
- Consensus CDS
-
CCDS17038.2
- UniProtKB/Swiss-Prot
- A2A5G2, Q3U2X2, Q8BXQ2, Q99JA3
- UniProtKB/TrEMBL
-
Q3U5R2
- Related
- ENSMUSP00000099390.5, ENSMUST00000103101.11
- Conserved Domains (1) summary
-
- pfam04113
Location:36 → 572
- Gpi16; Gpi16 subunit, GPI transamidase component
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
164339461..164350221
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001407281.1: Suppressed sequence
- Description
- NM_001407281.1: This RefSeq was removed because currently there is insufficient support for the transcript.