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    A2m alpha-2-macroglobulin [ Mus musculus (house mouse) ]

    Gene ID: 232345, updated on 10-Dec-2024

    Summary

    Official Symbol
    A2mprovided by MGI
    Official Full Name
    alpha-2-macroglobulinprovided by MGI
    Primary source
    MGI:MGI:2449119
    See related
    Ensembl:ENSMUSG00000030111 AllianceGenome:MGI:2449119
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A2mp
    Summary
    Predicted to enable several functions, including cytokine binding activity; growth factor binding activity; and serine-type endopeptidase inhibitor activity. Acts upstream of or within stem cell differentiation. Predicted to be active in extracellular space. Is expressed in several structures, including brain; embryo mesenchyme; liver; meninges; and retina. Human ortholog(s) of this gene implicated in COVID-19; background diabetic retinopathy; multiple sclerosis; neurodegenerative disease (multiple); and obstructive lung disease. Orthologous to human A2M (alpha-2-macroglobulin). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver E18 (RPKM 215.0), placenta adult (RPKM 27.2) and 1 other tissue See more
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    Genomic context

    See A2m in Genome Data Viewer
    Location:
    6 F1; 6 57.49 cM
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (121612920..121656197)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (121636165..121679238)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene IQ motif and Sec7 domain 3 Neighboring gene STARR-seq mESC enhancer starr_17212 Neighboring gene STARR-seq mESC enhancer starr_17213 Neighboring gene STARR-seq mESC enhancer starr_17214 Neighboring gene voltage-dependent anion-selective channel protein 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17215 Neighboring gene murinoglobulin 1 pseudogene Neighboring gene thymosin beta-10 pseudogene Neighboring gene murinoglobulin 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (3) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables brain-derived neurotrophic factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables brain-derived neurotrophic factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calcium-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium-dependent protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables endopeptidase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables growth factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables interleukin-1 binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables interleukin-1 binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables interleukin-8 binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables interleukin-8 binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables nerve growth factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nerve growth factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptidase inhibitor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables protease binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protease binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protease binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables serine-type endopeptidase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables tumor necrosis factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables tumor necrosis factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in acute inflammatory response to antigenic stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in acute-phase response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in embryonic liver development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in female pregnancy IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in luteinization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of complement activation, lectin pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of complement activation, lectin pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to carbon dioxide IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to glucocorticoid IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to nutrient IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to prostaglandin E IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within stem cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175628.3NP_783327.2  alpha-2-macroglobulin-P precursor

      See identical proteins and their annotated locations for NP_783327.2

      Status: VALIDATED

      Source sequence(s)
      AI850558, BC072642, BY785372, CN701262
      Consensus CDS
      CCDS39617.1
      UniProtKB/Swiss-Prot
      E9QMQ7, Q6GQT1, Q811S0
      Related
      ENSMUSP00000032203.8, ENSMUST00000032203.9
      Conserved Domains (6) summary
      cd02897
      Location:9581264
      A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
      pfam00207
      Location:738828
      A2M; Alpha-2-macroglobulin family
      pfam01835
      Location:135227
      A2M_N; MG2 domain
      pfam07677
      Location:13761463
      A2M_recep; A-macroglobulin receptor
      pfam07678
      Location:10101266
      A2M_comp; A-macroglobulin complement component
      pfam07703
      Location:473612
      A2M_N_2; Alpha-2-macroglobulin family N-terminal region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      121612920..121656197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011241322.3XP_011239624.1  alpha-2-macroglobulin-P isoform X1

      Conserved Domains (5) summary
      pfam00207
      Location:738828
      A2M; Alpha-2-macroglobulin family
      pfam17789
      Location:356451
      MG4; Macroglobulin domain MG4
      pfam17791
      Location:229316
      MG3; Macroglobulin domain MG3
      pfam01835
      Location:135227
      A2M_N; MG2 domain
      pfam07703
      Location:465612
      A2M_N_2; Alpha-2-macroglobulin family N-terminal region