NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_031813.1 RefSeqGene
- Range
-
5126..108407
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001317924.2 → NP_001304853.1 WD repeat-containing protein 19 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in its 5' UTR compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (2) that has a shorter N-terminus, compared to isoform 1
- Source sequence(s)
-
AK225588, AK294730
- UniProtKB/TrEMBL
- B4DGR6, B4E286
- Conserved Domains (8) summary
-
- COG0457
Location:702 → 982
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- COG2319
Location:2 → 186
- WD40; WD40 repeat [General function prediction only]
- COG5290
Location:672 → 770
- COG5290; IkappaB kinase complex, IKAP component [Transcription]
- sd00006
Location:619 → 643
- TPR; TPR repeat [structural motif]
- pfam12773
Location:1093 → 1135
- DZR; Double zinc ribbon
- pfam15911
Location:348 → 404
- WD40_3; WD domain, G-beta repeat
- sd00039
Location:73 → 112
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:114 → 186
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_025132.4 → NP_079408.3 WD repeat-containing protein 19 isoform 1
See identical proteins and their annotated locations for NP_079408.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AB046858, AK026780, AK122908, AY029257, BC032578
- Consensus CDS
-
CCDS47042.1
- UniProtKB/Swiss-Prot
- B5MEF2, Q8N5B4, Q8NEZ3, Q9H5S0, Q9HCD4
- UniProtKB/TrEMBL
-
B4E286
- Related
- ENSP00000382717.3, ENST00000399820.8
- Conserved Domains (8) summary
-
- COG0457
Location:862 → 1142
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- COG2319
Location:19 → 345
- WD40; WD40 repeat [General function prediction only]
- COG5290
Location:832 → 930
- COG5290; IkappaB kinase complex, IKAP component [Transcription]
- sd00006
Location:779 → 803
- TPR; TPR repeat [structural motif]
- pfam12773
Location:1253 → 1295
- DZR; Double zinc ribbon
- pfam15911
Location:508 → 564
- WD40_3; WD domain, G-beta repeat
- sd00039
Location:57 → 98
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:26 → 302
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
39182529..39285810
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011513724.2 → XP_011512026.1 WD repeat-containing protein 19 isoform X1
- UniProtKB/TrEMBL
-
B4E286
- Conserved Domains (8) summary
-
- COG0457
Location:866 → 1146
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- COG2319
Location:19 → 345
- WD40; WD40 repeat [General function prediction only]
- COG5290
Location:836 → 934
- COG5290; IkappaB kinase complex, IKAP component [Transcription]
- sd00006
Location:783 → 807
- TPR; TPR repeat [structural motif]
- pfam12773
Location:1257 → 1299
- DZR; Double zinc ribbon
- pfam15911
Location:508 → 564
- WD40_3; WD domain, G-beta repeat
- sd00039
Location:57 → 98
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:26 → 302
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011513725.3 → XP_011512027.1 WD repeat-containing protein 19 isoform X2
- UniProtKB/TrEMBL
-
B4E286
- Conserved Domains (8) summary
-
- COG0457
Location:844 → 1124
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- COG2319
Location:32 → 323
- WD40; WD40 repeat [General function prediction only]
- COG5290
Location:814 → 912
- COG5290; IkappaB kinase complex, IKAP component [Transcription]
- sd00006
Location:761 → 785
- TPR; TPR repeat [structural motif]
- pfam12773
Location:1235 → 1277
- DZR; Double zinc ribbon
- pfam15911
Location:486 → 542
- WD40_3; WD domain, G-beta repeat
- sd00039
Location:35 → 76
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:32 → 324
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047416030.1 → XP_047271986.1 WD repeat-containing protein 19 isoform X3
- UniProtKB/TrEMBL
-
B4E286
-
XM_047416031.1 → XP_047271987.1 WD repeat-containing protein 19 isoform X4
- UniProtKB/TrEMBL
-
B4E286
-
XM_047416032.1 → XP_047271988.1 WD repeat-containing protein 19 isoform X5
- UniProtKB/TrEMBL
-
B4E286
-
XM_047416034.1 → XP_047271990.1 WD repeat-containing protein 19 isoform X7
-
XM_047416035.1 → XP_047271991.1 WD repeat-containing protein 19 isoform X8
-
XM_047416033.1 → XP_047271989.1 WD repeat-containing protein 19 isoform X6
- UniProtKB/TrEMBL
-
B4E286
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
39152167..39255444
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054350632.1 → XP_054206607.1 WD repeat-containing protein 19 isoform X1
- UniProtKB/TrEMBL
-
B4E286
-
XM_054350633.1 → XP_054206608.1 WD repeat-containing protein 19 isoform X2
- UniProtKB/TrEMBL
-
B4E286
-
XM_054350634.1 → XP_054206609.1 WD repeat-containing protein 19 isoform X3
- UniProtKB/TrEMBL
-
B4E286
-
XM_054350635.1 → XP_054206610.1 WD repeat-containing protein 19 isoform X4
- UniProtKB/TrEMBL
-
B4E286
-
XM_054350636.1 → XP_054206611.1 WD repeat-containing protein 19 isoform X5
- UniProtKB/TrEMBL
-
B4E286
-
XM_054350638.1 → XP_054206613.1 WD repeat-containing protein 19 isoform X7
-
XM_054350639.1 → XP_054206614.1 WD repeat-containing protein 19 isoform X8
-
XM_054350637.1 → XP_054206612.1 WD repeat-containing protein 19 isoform X6
- UniProtKB/TrEMBL
-
B4E286