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    WD repeat-containing protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538796, updated on 18-Sep-2024

    Summary

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    Official Full Name
    WD repeat-containing protein
    Primary source
    PomBase:SPCC63.06
    Locus tag
    SPOM_SPCC63.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (845911..847352)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene spore wall alpha-1,4-glucan synthase, meiotic Mok14 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TAP42-like family protein Neighboring gene tRNA-Ser Neighboring gene ncRNA Neighboring gene tRNA guanylyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
    2. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
    3. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein
    NP_587980.1
    • WD repeat protein, human WDR89 family

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      845911..847352
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022971.3 → NP_587980.1  WD repeat-containing protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587980.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7T2
      Conserved Domains (4) summary
      COG2319
      Location:5 → 331
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:59 → 97
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:47 → 180
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl19574
      Location:261 → 330
      Salt_tol_Pase; Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase)
    Nucleotide Protein
    Heading Accession and Version

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