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    ups1 phosphatidic acid transfer protein Ups1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542962, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ups1
    Official Full Name
    phosphatidic acid transfer protein Ups1
    Primary source
    PomBase:SPAP8A3.10
    Locus tag
    SPOM_SPAP8A3.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ups1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (5334073..5334807)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene serine/threonine protein phosphatase PP2A scaffold subunit Paa1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GTPase Mtg2 Neighboring gene ncRNA Neighboring gene tripeptidyl-peptidase II Tpp2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure-function insights into direct lipid transfer between membranes by Mmm1-Mdm12 of ERMES. Kawano S, et al. J Cell Biol, 2018 Mar 5. PMID 29279306, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables phosphatidic acid transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intermembrane phospholipid transfer TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in mitochondrial membrane organization IC
    Inferred by Curator
    more info
    		  
    involved_in phospholipid translocation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in phospholipid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in extrinsic component of mitochondrial inner membrane ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitochondrion HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    phosphatidic acid transfer protein Ups1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5334073..5334807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020380.3 → NP_594949.1  phosphatidic acid transfer protein Ups1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594949.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UT07
      Conserved Domains (1) summary
      pfam04707
      Location:16 → 166
      PRELI; PRELI-like family
    Nucleotide Protein
    Heading Accession and Version

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