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    ngg1 SAGA complex subunit Ngg1/Ada3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540436, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ngg1
    Official Full Name
    SAGA complex subunit Ngg1/Ada3
    Primary source
    PomBase:SPBC28F2.10c
    Locus tag
    SPOM_SPBC28F2.10C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    ada3; kap1
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    Genomic context

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    See ngg1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (1586592..1588398, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene DNA recombination mediator Sfr1 Neighboring gene HRD ubiquitin ligase complex subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor TFIIA complex large subunit Toa1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene upstream binding transcription factor, RNA polymerase I specific, Hmo1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of the kinesin-related protein, Krp1p, in Schizosaccharomyces pombe. Jeong JW, et al. Mol Cells, 2002 Jun 30. PMID 12132578
    2. Nucleosome eviction in mitosis assists condensin loading and chromosome condensation. Toselli-Mollereau E, et al. EMBO J, 2016 Jul 15. PMID 27266525, Free PMC Article
    3. The SAGA histone acetyltransferase complex regulates leucine uptake through the Agp3 permease in fission yeast. Takahashi H, et al. J Biol Chem, 2012 Nov 2. PMID 22992726, Free PMC Article
    4. Anti-silencing factor Epe1 associates with SAGA to regulate transcription within heterochromatin. Bao K, et al. Genes Dev, 2019 Jan 1. PMID 30573453, Free PMC Article
    5. Mitotic spindle formation in the absence of Polo kinase. Kim J, et al. Proc Natl Acad Sci U S A, 2022 Mar 22. PMID 35286199, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of SAGA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of SAGA complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of SAGA complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    SAGA complex subunit Ngg1/Ada3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1586592..1588398 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021566.3 → NP_595671.1  SAGA complex subunit Ngg1/Ada3 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595671.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9USU8
      Conserved Domains (1) summary
      pfam10198
      Location:390 → 508
      Ada3; Histone acetyltransferases subunit 3
    Nucleotide Protein
    Heading Accession and Version

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