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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 1466423, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000028683
    Locus tag
    YLR406C-A
    See related
    AllianceGenome:SGD:S000028683; FungiDB:YLR406C-A; VEuPathDB:YLR406C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in fungal-type vacuole. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (932206..932355, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene tRNA dihydrouridine synthase Neighboring gene ribosomal 60S subunit protein L31B Neighboring gene Gag1p Neighboring gene Bls1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An integrated approach for finding overlooked genes in yeast. Kumar A, et al. Nat Biotechnol, 2002 Jan. PMID 11753363
    2. The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. Johnston M, et al. Nature, 1997 May 29. PMID 9169871, Free PMC Article
    3. The complete spectrum of yeast chromosome instability genes identifies candidate CIN cancer genes and functional roles for ASTRA complex components. Stirling PC, et al. PLoS Genet, 2011 Apr. PMID 21552543, Free PMC Article
    4. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article
    5. A global genetic interaction network maps a wiring diagram of cellular function. Costanzo M, et al. Science, 2016 Sep 23. PMID 27708008, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in fungal-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_878135.1
    • hypothetical protein; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      932206..932355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184610.1 → NP_878135.1  TPA: uncharacterized protein YLR406C-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_878135.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZ40, Q8TGT1
      UniProtKB/TrEMBL
      C7GXK9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8TGT1.1

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