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    cca1 tRNA nucleotidyltransferase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542977, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cca1
    Official Full Name
    tRNA nucleotidyltransferase
    Primary source
    PomBase:SPAC1093.04c
    Locus tag
    SPOM_SPAC1093.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See cca1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003424.3 (4613715..4618439, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene PPR repeat-containing protein Ppr5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pyridoxamine 5'-phosphate oxidase Neighboring gene inositol polyphosphate phosphatase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase Hca4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Schizosaccharomyces pombe contains separate CC- and A-adding tRNA nucleotidyltransferases. Reid NE, et al. Biochem Biophys Res Commun, 2019 Jan 15. PMID 30528393
    2. Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA. Zhang K, et al. Science, 2011 Mar 25. PMID 21436456, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables CTP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables CTP:tRNA cytidylyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables CTP:tRNA cytidylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial tRNA 3'-end processing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in tRNA 3'-terminal CCA addition IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA 3'-terminal CCA addition IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in mitochondrion EXP
    Inferred from Experiment
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA nucleotidyltransferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4613715..4618439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020080.4 → NP_594651.2  tRNA nucleotidyltransferase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594651.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UTQ0
      Conserved Domains (1) summary
      COG0617
      Location:11 → 483
      PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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