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    cat1 plasma membrane arginine/lysine amino acid transmembrane transporter Cat1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543573, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cat1
    Official Full Name
    plasma membrane arginine/lysine amino acid transmembrane transporter Cat1
    Primary source
    PomBase:SPAC869.11
    Locus tag
    SPOM_SPAC869.11
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPAC922.08c
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    Genomic context

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    See cat1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (5489134..5491476, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-[acyl-carrier-protein]reductase Neighboring gene ncRNA Neighboring gene aldehyde dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene proline transmembrane transporter Put4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Using canavanine resistance to measure mutation rates in Schizosaccharomyces pombe. Pai CC, et al. PLoS One, 2023. PMID 36626373, Free PMC Article
    2. Characterization of canavanine-resistance of cat1 and vhc1 deletions and a dominant any1 mutation in fission yeast. Ait Saada A, et al. PLoS One, 2022. PMID 35639710, Free PMC Article
    3. Genome-wide screen reveals novel mechanisms for regulating cobalt uptake and detoxification in fission yeast. Ryuko S, et al. Mol Genet Genomics, 2012 Aug. PMID 22806344
    4. The Tsc/Rheb signaling pathway controls basic amino acid uptake via the Cat1 permease in fission yeast. Aspuria PJ, et al. Mol Genet Genomics, 2008 May. PMID 18219492, Free PMC Article
    5. Fission yeast arrestin-related trafficking adaptor, Arn1/Any1, is ubiquitinated by Pub1 E3 ligase and regulates endocytosis of Cat1 amino acid transporter. Nakashima A, et al. Biol Open, 2014 May 29. PMID 24876389, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Characterization of canavanine-resistance of cat1 and vhc1 deletions and a dominant any1 mutation in fission yeast.
      Title: Characterization of canavanine-resistance of cat1 and vhc1 deletions and a dominant any1 mutation in fission yeast.
    2. A crucial link between Tsc/Rheb signaling and the regulation of the basic amino acid permease in fission yeast.
      Title: The Tsc/Rheb signaling pathway controls basic amino acid uptake via the Cat1 permease in fission yeast.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables L-arginine transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables L-lysine transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-arginine import across plasma membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in L-lysine import across plasma membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in amino acid transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell division site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in medial membrane band IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasma membrane of cell tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasma membrane arginine/lysine amino acid transmembrane transporter Cat1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5489134..5491476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020439.3 → NP_595008.3  plasma membrane arginine/lysine amino acid transmembrane transporter Cat1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595008.3

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9URW8, Q9URZ4
      Conserved Domains (1) summary
      COG0833
      Location:40 → 580
      LysP; Amino acid permease [Amino acid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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