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    snu66 U4/U5/U6 small nuclear ribonucleoprotein complex subunit Snu66 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542774, updated on 18-Sep-2024

    Summary

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    Official Symbol
    snu66
    Official Full Name
    U4/U5/U6 small nuclear ribonucleoprotein complex subunit Snu66
    Primary source
    PomBase:SPAC167.03c
    Locus tag
    SPOM_SPAC167.03C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See snu66 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1554999..1557929)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ubiquitin-protein ligase E3 Neighboring gene protein mug143 Neighboring gene protein Dbs2 Neighboring gene putative TIM23 translocase complex-associated motor subunit Pam17 Neighboring gene geranylgeranyltransferase type 2 beta subunit Ptb1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GPI-mannosyltransferase II complex subunit Pga1 Neighboring gene serine/threonine protein kinase Ppk4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hub1 is an essential ubiquitin-like protein without functioning as a typical modifier in fission yeast. Yashiroda H, et al. Genes Cells, 2004 Dec. PMID 15569151
    2. Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast. Wilkinson CR, et al. Curr Biol, 2004 Dec 29. PMID 15620657
    3. Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex. Carnahan RH, et al. Eukaryot Cell, 2005 Mar. PMID 15755920, Free PMC Article
    4. Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing. Mishra SK, et al. Nature, 2011 May 25. PMID 21614000, Free PMC Article
    5. The histone variant H2A.Z promotes splicing of weak introns. Nissen KE, et al. Genes Dev, 2017 Apr 1. PMID 28446597, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in mRNA cis splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mRNA cis splicing, via spliceosome IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in maturation of 5S rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of U4/U6 x U5 tri-snRNP complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of spliceosomal complex IC
    Inferred by Curator
    more info
    		  

    General protein information

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    Preferred Names
    U4/U5/U6 small nuclear ribonucleoprotein complex subunit Snu66

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1554999..1557929
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018814.3 → NP_593382.1  U4/U5/U6 small nuclear ribonucleoprotein complex subunit Snu66 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593382.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94538
      Conserved Domains (1) summary
      pfam03343
      Location:10 → 639
      SART-1; SART-1 family
    Nucleotide Protein
    Heading Accession and Version

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