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    pms1 MutL family mismatch-repair protein Pms1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542582, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pms1
    Official Full Name
    MutL family mismatch-repair protein Pms1
    Primary source
    PomBase:SPAC19G12.02c
    Locus tag
    SPOM_SPAC19G12.02C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See pms1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003424.3 (4044821..4048487, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene anaphase-promoting complex platform subcomplex scaffold WD repeat subunit Apc4/Cut20 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene chitin deacetylase Cda1 Neighboring gene ureidoglycolate hydrolase Neighboring gene citrate transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mismatch repair in Schizosaccharomyces pombe requires the mutL homologous gene pms1: molecular cloning and functional analysis. Schär P, et al. Genetics, 1997 Aug. PMID 9258673, Free PMC Article
    2. Involvement of nucleotide-excision repair in msh2 pms1-independent mismatch repair. Fleck O, et al. Nat Genet, 1999 Mar. PMID 10080187
    3. Schizosaccharomyces pombe exo1 is involved in the same mismatch repair pathway as msh2 and pms1. Rudolph C, et al. Curr Genet, 1998 Dec. PMID 9871115
    4. Different frameshift mutation spectra in non-repetitive DNA of MutSalpha- and MutLalpha-deficient fission yeast cells. Marti TM, et al. DNA Repair (Amst), 2003 May 13. PMID 12713814
    5. Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Mansour AA, et al. Genetics, 2001 May. PMID 11333219, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mismatched DNA binding NAS
    Non-traceable Author Statement
    more info
    		  
    Process Evidence Code Pubs
    involved_in maintenance of DNA repeat elements IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in meiotic mismatch repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mismatch repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mismatch repair IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MutLalpha complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nuclear chromosome ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    MutL family mismatch-repair protein Pms1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4044821..4048487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356149.2 → NP_001342828.1  MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P54280
      Conserved Domains (1) summary
      COG0323
      Location:1 → 793
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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