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    cta5 Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542076, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cta5
    Official Full Name
    Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5
    Primary source
    PomBase:SPAC29A4.19c
    Locus tag
    SPOM_SPAC29A4.19C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See cta5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003424.3 (5106559..5113025)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene RSC-type complex ATPase Snf21 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene elongator complex histone acetyltransferase subunit Elp3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene histone chaperone, Clr6 and Rpd3L complex subunit Prw1 Neighboring gene ncRNA Neighboring gene integral mitochondrial outer membrane (MOM) protein Neighboring gene serine/threonine protein kinase Hal4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a fission yeast P(5)-type ATPase homologue that is essential for Ca(2+)/Mn(2+ )homeostasis in the absence of P(2)-type ATPases. Furune T, et al. Genes Genet Syst, 2008 Oct. PMID 19168988
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the putative P(5)-type ATPase encoded by SPAC29A4.19c is essential for Ca(2+) and Mn(2+ )homeostasis in the absence of P(2)-type ATPases, Pmc1p or Pmr1p, respectively.
      Title: Characterization of a fission yeast P(5)-type ATPase homologue that is essential for Ca(2+)/Mn(2+ )homeostasis in the absence of P(2)-type ATPases.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled monoatomic cation transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATPase-coupled monoatomic cation transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables P-type transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in endoplasmic reticulum HDA PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5106559..5113025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020292.2 → NP_594863.1  Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594863.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14022
      Conserved Domains (5) summary
      COG4087
      Location:809 → 853
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01657
      Location:33 → 1083
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
      pfam00122
      Location:226 → 468
      E1-E2_ATPase; E1-E2 ATPase
      pfam00690
      Location:143 → 214
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam13246
      Location:592 → 629
      Cation_ATPase; Cation transport ATPase (P-type)
    Nucleotide Protein
    Heading Accession and Version

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