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    mitochondrial ribosomal protein subunit L9 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538814, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mitochondrial ribosomal protein subunit L9
    Primary source
    PomBase:SPCC777.17c
    Locus tag
    SPOM_SPCC777.17C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003421.2 (1618146..1619058, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene NEDD8-conjugating enzyme Ubc12 Neighboring gene ER stress response thioredoxin family membrane disulfide oxidoreductase Neighboring gene protein Gta3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene retromer complex subunit Vps35

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit ISM
    Inferred from Sequence Model
    more info
    		  
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    mitochondrial ribosomal protein subunit L9

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1618146..1619058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023249.3 → NP_588259.1  mitochondrial ribosomal protein subunit L9 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588259.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P801
      Conserved Domains (2) summary
      COG0359
      Location:1 → 101
      RplI; Ribosomal protein L9 [Translation, ribosomal structure and biogenesis]
      pfam01281
      Location:44 → 77
      Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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