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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001025436.3 → NP_001020607.1 sperm-associated antigen 16 protein isoform 2
See identical proteins and their annotated locations for NP_001020607.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and lacks a large portion of the 3' coding region, compared to variant 1. The encoded isoform (2) is significantly shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC067756, CA313710
- Consensus CDS
-
CCDS46508.1
- UniProtKB/Swiss-Prot
-
Q8N0X2
- UniProtKB/TrEMBL
-
Q4G1A2
- Related
- ENSP00000415079.2, ENST00000432529.6
-
NM_024532.5 → NP_078808.3 sperm-associated antigen 16 protein isoform 1
See identical proteins and their annotated locations for NP_078808.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AF310672, AF490390, AK302351
- Consensus CDS
-
CCDS2396.1
- UniProtKB/Swiss-Prot
- Q498B7, Q658W1, Q68DB3, Q6I9Z6, Q8N0X2, Q8N9C7, Q9H601
- UniProtKB/TrEMBL
-
Q4G1A2
- Related
- ENSP00000332592.5, ENST00000331683.10
- Conserved Domains (4) summary
-
- COG2319
Location:341 → 631
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:344 → 631
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:355 → 392
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:160 → 271
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
RNA
-
NR_047659.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has multiple differences, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK302351, AW207406, BC025379
- Related
-
ENST00000406979.6
-
NR_047660.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an internal exon in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK302351, BC025379
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
213284464..214410501
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011511814.2 → XP_011510116.1 sperm-associated antigen 16 protein isoform X1
- UniProtKB/TrEMBL
-
Q4G1A2
- Conserved Domains (4) summary
-
- COG2319
Location:310 → 600
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:313 → 600
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:324 → 361
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:129 → 240
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_011511820.3 → XP_011510122.1 sperm-associated antigen 16 protein isoform X7
- Conserved Domains (4) summary
-
- COG2319
Location:302 → 569
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:344 → 569
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:355 → 392
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:160 → 271
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_011511815.3 → XP_011510117.1 sperm-associated antigen 16 protein isoform X2
- Conserved Domains (4) summary
-
- COG2319
Location:342 → 577
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:348 → 580
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:356 → 392
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:160 → 271
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_011511817.3 → XP_011510119.1 sperm-associated antigen 16 protein isoform X4
- Conserved Domains (3) summary
-
- COG2319
Location:341 → 561
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:348 → 551
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:356 → 392
- 7WD40; WD40 repeat [structural motif]
-
XM_011511816.4 → XP_011510118.1 sperm-associated antigen 16 protein isoform X3
- Conserved Domains (4) summary
-
- COG2319
Location:343 → 585
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:348 → 551
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:356 → 392
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:160 → 271
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_011511818.3 → XP_011510120.1 sperm-associated antigen 16 protein isoform X6
- Conserved Domains (4) summary
-
- COG2319
Location:341 → 561
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:348 → 551
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:356 → 392
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:160 → 271
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_011511824.3 → XP_011510126.1 sperm-associated antigen 16 protein isoform X9
- Conserved Domains (3) summary
-
- COG2319
Location:341 → 516
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:348 → 518
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:356 → 392
- 7WD40; WD40 repeat [structural motif]
-
XM_011511831.3 → XP_011510133.1 sperm-associated antigen 16 protein isoform X15
See identical proteins and their annotated locations for XP_011510133.1
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_011511832.3 → XP_011510134.1 sperm-associated antigen 16 protein isoform X16
See identical proteins and their annotated locations for XP_011510134.1
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_011511828.3 → XP_011510130.1 sperm-associated antigen 16 protein isoform X13
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_011511829.3 → XP_011510131.1 sperm-associated antigen 16 protein isoform X14
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_011511827.3 → XP_011510129.1 sperm-associated antigen 16 protein isoform X12
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_011511837.4 → XP_011510139.1 sperm-associated antigen 16 protein isoform X20
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_006712746.4 → XP_006712809.1 sperm-associated antigen 16 protein isoform X18
- UniProtKB/TrEMBL
-
E7EWV3
- Related
- ENSP00000400847.1, ENST00000447990.1
-
XM_017004899.3 → XP_016860388.1 sperm-associated antigen 16 protein isoform X17
-
XM_011511823.4 → XP_011510125.1 sperm-associated antigen 16 protein isoform X8
See identical proteins and their annotated locations for XP_011510125.1
- UniProtKB/TrEMBL
- B4DYB5, C9JV44
- Conserved Domains (2) summary
-
- cd00200
Location:241 → 528
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:252 → 289
- 7WD40; WD40 repeat [structural motif]
-
XM_011511819.3 → XP_011510121.1 sperm-associated antigen 16 protein isoform X5
- UniProtKB/TrEMBL
-
Q4G1A2
- Conserved Domains (4) summary
-
- COG2319
Location:287 → 577
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:290 → 577
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:301 → 338
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:106 → 217
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_047445817.1 → XP_047301773.1 sperm-associated antigen 16 protein isoform X10
- UniProtKB/TrEMBL
- B4DYB5, C9JV44
-
XM_017004897.1 → XP_016860386.1 sperm-associated antigen 16 protein isoform X10
- UniProtKB/TrEMBL
- B4DYB5, C9JV44
- Conserved Domains (4) summary
-
- COG2319
Location:222 → 512
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:225 → 512
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:236 → 273
- 7WD40; WD40 repeat [structural motif]
- cl09111
Location:41 → 152
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
-
XM_017004898.1 → XP_016860387.1 sperm-associated antigen 16 protein isoform X11
-
XM_024453140.2 → XP_024308908.1 sperm-associated antigen 16 protein isoform X19
- Conserved Domains (2) summary
-
- cd00200
Location:38 → 325
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:49 → 86
- 7WD40; WD40 repeat [structural motif]
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
213765296..214894995
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054343872.1 → XP_054199847.1 sperm-associated antigen 16 protein isoform X1
- UniProtKB/TrEMBL
-
Q4G1A2
-
XM_054343878.1 → XP_054199853.1 sperm-associated antigen 16 protein isoform X7
-
XM_054343873.1 → XP_054199848.1 sperm-associated antigen 16 protein isoform X2
-
XM_054343875.1 → XP_054199850.1 sperm-associated antigen 16 protein isoform X4
-
XM_054343874.1 → XP_054199849.1 sperm-associated antigen 16 protein isoform X3
-
XM_054343877.1 → XP_054199852.1 sperm-associated antigen 16 protein isoform X6
-
XM_054343880.1 → XP_054199855.1 sperm-associated antigen 16 protein isoform X9
-
XM_054343882.1 → XP_054199857.1 sperm-associated antigen 16 protein isoform X21
-
XM_054343887.1 → XP_054199862.1 sperm-associated antigen 16 protein isoform X15
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343888.1 → XP_054199863.1 sperm-associated antigen 16 protein isoform X16
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343885.1 → XP_054199860.1 sperm-associated antigen 16 protein isoform X13
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343886.1 → XP_054199861.1 sperm-associated antigen 16 protein isoform X14
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343884.1 → XP_054199859.1 sperm-associated antigen 16 protein isoform X12
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343892.1 → XP_054199867.1 sperm-associated antigen 16 protein isoform X20
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343890.1 → XP_054199865.1 sperm-associated antigen 16 protein isoform X18
- UniProtKB/TrEMBL
-
E7EWV3
-
XM_054343889.1 → XP_054199864.1 sperm-associated antigen 16 protein isoform X17
-
XM_054343879.1 → XP_054199854.1 sperm-associated antigen 16 protein isoform X8
- UniProtKB/TrEMBL
- B4DYB5, C9JV44
-
XM_054343876.1 → XP_054199851.1 sperm-associated antigen 16 protein isoform X5
- UniProtKB/TrEMBL
-
Q4G1A2
-
XM_054343881.1 → XP_054199856.1 sperm-associated antigen 16 protein isoform X10
- UniProtKB/TrEMBL
- B4DYB5, C9JV44
-
XM_054343883.1 → XP_054199858.1 sperm-associated antigen 16 protein isoform X11
-
XM_054343891.1 → XP_054199866.1 sperm-associated antigen 16 protein isoform X19