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    AURKAP1 aurora kinase A pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 6791, updated on 10-Dec-2024

    Summary

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    Official Symbol
    AURKAP1provided by HGNC
    Official Full Name
    aurora kinase A pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:18611
    See related
    AllianceGenome:HGNC:18611
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    STK6P; AurAps1; AURKAPS1
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    Genomic context

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    See AURKAP1 in Genome Data Viewer
    Location:
    1q41
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (220266179..220267715, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (219505459..219506995, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (220439521..220441057, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RAB3 GTPase activating non-catalytic protein subunit 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1824 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2555 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2556 Neighboring gene sorting nexin 2 pseudogene 1 Neighboring gene MPRA-validated peak706 silencer Neighboring gene mortality factor 4 like 1 pseudogene 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:220440608-220441807 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:220443889-220444390 Neighboring gene X-ray repair cross complementing 6 pseudogene 3 Neighboring gene ribosomal protein lateral stalk subunit P0 pseudogene 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Long noncoding RNA AURKAPS1 potentiates malignant hepatocellular carcinoma progression by regulating miR-142, miR-155 and miR-182. Li J, et al. Sci Rep, 2019 Dec 23. PMID 31873123, Free PMC Article
    2. Assignment of STK6 to human chromosome 20q13.2-->q13.3 and a pseudogene STK6P to 1q41-->q42. Kimura M, et al. Cytogenet Cell Genet, 1997. PMID 9605851
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • serine/threonine kinase 6 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_001587.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC050630

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      220266179..220267715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      219505459..219506995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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