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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001113208.1 → NP_001106679.1 neural cell adhesion molecule 2 isoform a precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AF016620, AW121550, BB663005, BC119027, BM933307
- Consensus CDS
-
CCDS49888.1
- UniProtKB/Swiss-Prot
- O35136, O35962, Q0VF23
- Related
- ENSMUSP00000063468.4, ENSMUST00000067602.5
- Conserved Domains (7) summary
-
- cd05866
Location:21 → 112
- Ig1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2
- smart00408
Location:414 → 482
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:308 → 395
- IG_like; Immunoglobulin like
- cd00063
Location:496 → 588
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:22 → 111
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:594 → 678
- fn3; Fibronectin type III domain
- cl11960
Location:300 → 397
- Ig; Immunoglobulin domain
-
NM_010954.4 → NP_035084.1 neural cell adhesion molecule 2 isoform b precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks several exons and includes an alternate 3' terminal exon, compared to variant 1. It encodes isoform b which is shorter and has a distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
AC123849, AW121550, BC119027
- Consensus CDS
-
CCDS28281.1
- UniProtKB/Swiss-Prot
-
O35136
- Related
- ENSMUSP00000049390.8, ENSMUST00000037785.14
- Conserved Domains (7) summary
-
- cd05866
Location:21 → 112
- Ig1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2
- smart00408
Location:414 → 482
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:308 → 395
- IG_like; Immunoglobulin like
- cd00063
Location:496 → 588
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:22 → 111
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:594 → 678
- fn3; Fibronectin type III domain
- cl11960
Location:300 → 397
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
80997501..81425549
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036159816.1 → XP_036015709.1 neural cell adhesion molecule 2 isoform X2
- UniProtKB/TrEMBL
-
Q3V1M4
- Conserved Domains (5) summary
-
- smart00408
Location:128 → 189
- IGc2; Immunoglobulin C-2 Type
- cd00096
Location:300 → 305
- Ig; Ig strand A [structural motif]
- cd05866
Location:21 → 113
- IgI_1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2; member of the I-set of Ig superfamily (IgSF) domains
- cd20970
Location:209 → 298
- IgI_1_MuSK; agrin-responsive first immunoglobulin-like domains (Ig1) of the MuSK ectodomain; a member of the I-set of IgSF domains
- cl11960
Location:300 → 348
- Ig; Immunoglobulin domain
-
XM_036159815.1 → XP_036015708.1 neural cell adhesion molecule 2 isoform X1
- Conserved Domains (5) summary
-
- cd00063
Location:285 → 377
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:383 → 467
- fn3; Fibronectin type III domain
- pfam13927
Location:190 → 268
- Ig_3; Immunoglobulin domain
- cd00096
Location:89 → 94
- Ig; Ig strand A [structural motif]
- cl11960
Location:89 → 186
- Ig; Immunoglobulin domain