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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854833, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001455
    Locus tag
    YIR016W
    See related
    AllianceGenome:SGD:S000001455; FungiDB:YIR016W; VEuPathDB:YIR016W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable ATP binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: IX
    Exon count:
    1
    Sequence:
    Chromosome: IX; NC_001141.2 (382628..383425)

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Vld1p Neighboring gene ribonuclease P protein subunit RPR2 Neighboring gene Met28p Neighboring gene Yap5p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001141.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. S. cerevisiae Vts1p induces deadenylation-dependent transcript degradation and interacts with the Ccr4p-Pop2p-Not deadenylase complex. Rendl LM, et al. RNA, 2008 Jul. PMID 18469165, Free PMC Article
    2. The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast. Williams RM, et al. Proc Natl Acad Sci U S A, 2002 Oct 15. PMID 12370439, Free PMC Article
    3. Identification of She3 as an SCF(Grr1) substrate in budding yeast. Wang R, et al. PLoS One, 2012. PMID 23144720, Free PMC Article
    4. Mechanisms of cell cycle control revealed by a systematic and quantitative overexpression screen in S. cerevisiae. Niu W, et al. PLoS Genet, 2008 Jul 11. PMID 18617996, Free PMC Article
    5. The nucleotide sequence of Saccharomyces cerevisiae chromosome IX. Churcher C, et al. Nature, 1997 May 29. PMID 9169870

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_012281.1
    • hypothetical protein; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; overexpression causes a cell cycle delay or arrest; non-essential gene; YIR016W has a paralog, YOL036W, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2 Reference assembly

      Range
      382628..383425
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179538.1 → NP_012281.1  TPA: uncharacterized protein YIR016W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012281.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VVU6, P40572
      UniProtKB/TrEMBL
      B3LTJ3, N1P2B2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40572.1

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