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    Vmn2r7 vomeronasal 2, receptor 7 [ Mus musculus (house mouse) ]

    Gene ID: 319217, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Vmn2r7provided by MGI
    Official Full Name
    vomeronasal 2, receptor 7provided by MGI
    Primary source
    MGI:MGI:2441693
    See related
    Ensembl:ENSMUSG00000062200 AllianceGenome:MGI:2441693
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933425M15Rik
    Summary
    Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 1.8) See more
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    Genomic context

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    See Vmn2r7 in Genome Data Viewer
    Location:
    3 E1; 3 30.15 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (64598081..64627023, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (64690660..64719602, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3040 Neighboring gene vomeronasal 2, receptor, pseudogene 10 Neighboring gene vomeronasal 2, receptor, pseudogene 11 Neighboring gene STARR-seq mESC enhancer starr_07848 Neighboring gene vomeronasal 2, receptor, pseudogene 12 Neighboring gene STARR-seq mESC enhancer starr_07849 Neighboring gene STARR-seq mESC enhancer starr_07850 Neighboring gene predicted gene, 25222

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
    2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 2, receptor 7
    Names
    vomeronasal 2, receptor 1 pseudogene
    vomeronasal receptor Vmn2r7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175674.3 → NP_783605.2  vomeronasal 2, receptor 7

      Status: PROVISIONAL

      Source sequence(s)
      AC110575
      Consensus CDS
      CCDS50924.1
      UniProtKB/TrEMBL
      E9PZ74, L7N478
      Related
      ENSMUSP00000131220.2, ENSMUST00000168072.4
      Conserved Domains (4) summary
      pfam00003
      Location:534 → 778
      7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
      pfam01094
      Location:1 → 416
      ANF_receptor; Receptor family ligand binding region
      pfam07562
      Location:460 → 510
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:1 → 450
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      64598081..64627023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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