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    Nppc natriuretic peptide type C [ Mus musculus (house mouse) ]

    Gene ID: 18159, updated on 27-Nov-2024

    Summary

    Official Symbol
    Nppcprovided by MGI
    Official Full Name
    natriuretic peptide type Cprovided by MGI
    Primary source
    MGI:MGI:97369
    See related
    Ensembl:ENSMUSG00000026241 AllianceGenome:MGI:97369
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CNP; lbab
    Summary
    This gene encodes a member of the natriuretic peptide family. Natriuretic peptides are involved in the control of blood pressure, extracellular fluid volume and electrolyte homeostasis. The encoded protein also plays a role in sensory neuron bifurcation, and is a critical regulator of endochondral bone growth. The encoded protein is a ligand for the natriuretic peptide receptor B, and is synthesized as a preprohormone which is cleaved to produce a mature peptide. Mutations in this gene are associated with dwarfism resulting from impaired endochondral ossification. [provided by RefSeq, Apr 2011]
    Expression
    Biased expression in ovary adult (RPKM 20.5), cerebellum adult (RPKM 4.7) and 7 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Nppc in Genome Data Viewer
    Location:
    1 C5; 1 43.98 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (86594015..86598295, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (86666293..86670573, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2552 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:88483544-88483727 Neighboring gene COP9 signalosome subunit 7B Neighboring gene STARR-seq mESC enhancer starr_01597 Neighboring gene STARR-seq mESC enhancer starr_01598 Neighboring gene predicted gene, 41908 Neighboring gene STARR-seq mESC enhancer starr_01599 Neighboring gene DIS3 like 3'-5' exoribonuclease 2 Neighboring gene STARR-seq mESC enhancer starr_01600 Neighboring gene STARR-seq mESC enhancer starr_01601 Neighboring gene ribosomal protein L6 pseudogene Neighboring gene predicted gene, 41909

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Spontaneous (1) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC130574

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hormone receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables hormone receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide hormone activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables signaling receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in angiogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within animal organ development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in blood vessel diameter maintenance IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in blood vessel remodeling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in c-di-GMP signaling IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cGMP biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of cGMP biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cGMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cGMP-mediated signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to glycoprotein IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in chromosome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cumulus cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gastric emptying IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in growth plate cartilage chondrocyte differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in growth plate cartilage chondrocyte proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intracellular calcium ion homeostasis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of meiotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiotic cell cycle process involved in oocyte maturation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in multicellular organismal locomotion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of DNA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of DNA biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of collagen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of collagen biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of meiotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of meiotic cell cycle ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of neuron apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of oocyte maturation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of oocyte maturation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in oocyte development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ossification IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ovarian follicle development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cGMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cGMP-mediated signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of mast cell degranulation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of osteoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of osteoblast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of uterine smooth muscle relaxation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within post-embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein folding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in receptor guanylyl cyclase signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within receptor guanylyl cyclase signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in receptor guanylyl cyclase signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in receptor guanylyl cyclase signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within regulation of multicellular organism growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of smooth muscle cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within reproductive process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to axon injury IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to decreased oxygen levels IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to ischemia IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to oxygen-glucose deprivation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to wounding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to xenobiotic stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in secretory granule ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    C-type natriuretic peptide
    Names
    natriuretic peptide precursor C
    natriuretic peptide precursor type C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010933.5NP_035063.1  C-type natriuretic peptide preproprotein

      See identical proteins and their annotated locations for NP_035063.1

      Status: REVIEWED

      Source sequence(s)
      AC158132, AK036176, BY718381
      Consensus CDS
      CCDS15123.1
      UniProtKB/Swiss-Prot
      Q61839
      UniProtKB/TrEMBL
      Q544K5, Q9D288
      Related
      ENSMUSP00000027449.5, ENSMUST00000027449.6
      Conserved Domains (1) summary
      pfam00212
      Location:96126
      ANP; Atrial natriuretic peptide

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      86594015..86598295 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)