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    LOC105372969 uncharacterized LOC105372969 [ Homo sapiens (human) ]

    Gene ID: 105372969, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105372969
    Gene description
    uncharacterized LOC105372969
    See related
    Ensembl:ENSG00000233577
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105372969 in Genome Data Viewer
    Location:
    22q11.23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (25280389..25283066, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (25741559..25744235, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (25676356..25679033, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene crystallin beta B3 Neighboring gene crystallin beta B2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr22:25673044-25673734 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:25677730-25678664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:25678665-25679597 Neighboring gene immunoglobulin lambda like polypeptide 3, pseudogene Neighboring gene PHF10 pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188581.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022332

    2. NR_188582.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022332
      Related
      ENST00000823022.1

    3. NR_188583.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022332
      Related
      ENST00000823026.1

    4. NR_188584.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022332

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      25280389..25283066 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      25741559..25744235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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