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    LOC102723704 uncharacterized LOC102723704 [ Homo sapiens (human) ]

    Gene ID: 102723704, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC102723704
    Gene description
    uncharacterized LOC102723704
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in bone marrow (RPKM 10.7), thyroid (RPKM 7.7) and 25 other tissues See more
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    Genomic context

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    See LOC102723704 in Genome Data Viewer
    Location:
    4q24
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (102777037..102799575)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (106090989..106113563)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (103698194..103720732)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene mannosidase beta Neighboring gene mannosidase beta like pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21756 Neighboring gene WD repeat domain 12 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr4:103675856-103676033 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21757 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15599 Neighboring gene uncharacterized LOC124900743 Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:103746355-103747554 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:103748137-103748698 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:103748699-103749260 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21760 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21761 Neighboring gene UBE2D3 antisense RNA 1 Neighboring gene RNA, U7 small nuclear 151 pseudogene Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125932.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK098632

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      102777037..102799575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      106090989..106113563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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