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    Tex26 testis expressed 26 [ Mus musculus (house mouse) ]

    Gene ID: 75860, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Tex26provided by MGI
    Official Full Name
    testis expressed 26provided by MGI
    Primary source
    MGI:MGI:1923110
    See related
    Ensembl:ENSMUSG00000029660 AllianceGenome:MGI:1923110
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930588N13Rik
    Summary
    Predicted to be active in cytoplasm. Orthologous to human TEX26 (testis expressed 26). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 5.9) and lung adult (RPKM 0.3) See more
    Orthologs
    human all
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    Genomic context

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    See Tex26 in Genome Data Viewer
    Location:
    5 G3; 5 89.18 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149363112..149394443)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149439651..149470979)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11310 Neighboring gene cDNA sequence BC028471 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:150230952-150231169 Neighboring gene mesenteric estrogen dependent adipogenesis Neighboring gene RIKEN cDNA 4933425D22 gene Neighboring gene STARR-seq mESC enhancer starr_14933 Neighboring gene predicted gene 15997 Neighboring gene WD40 repeat domain 95 Neighboring gene predicted gene, 54316 Neighboring gene STARR-seq mESC enhancer starr_14938 Neighboring gene predicted gene, 35763

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
    2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    testis-expressed protein 26
    Names
    testis-expressed sequence 26 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310763.2 → NP_001297692.1  testis-expressed protein 26 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC114420
      Consensus CDS
      CCDS80476.1
      UniProtKB/TrEMBL
      A0A0M3HEP4, B7ZN43
      Related
      ENSMUSP00000031667.6, ENSMUST00000031667.8

    2. NM_001310764.2 → NP_001297693.1  testis-expressed protein 26 isoform 3

      See identical proteins and their annotated locations for NP_001297693.1

      Status: VALIDATED

      Source sequence(s)
      AC114420
      Consensus CDS
      CCDS80477.1
      UniProtKB/TrEMBL
      A0A0J9YTV2

    3. NM_001310765.2 → NP_001297694.1  testis-expressed protein 26 isoform 3

      See identical proteins and their annotated locations for NP_001297694.1

      Status: VALIDATED

      Source sequence(s)
      AC114420
      Consensus CDS
      CCDS80477.1
      UniProtKB/TrEMBL
      A0A0J9YTV2
      Related
      ENSMUSP00000143863.2, ENSMUST00000202920.4

    4. NM_029464.3 → NP_083740.1  testis-expressed protein 26 isoform 1

      See identical proteins and their annotated locations for NP_083740.1

      Status: VALIDATED

      Source sequence(s)
      AC114420
      Consensus CDS
      CCDS51707.1
      UniProtKB/Swiss-Prot
      Q0VB26
      UniProtKB/TrEMBL
      B7ZN43
      Related
      ENSMUSP00000143851.2, ENSMUST00000201683.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      149363112..149394443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006504946.5 → XP_006505009.1  testis-expressed protein 26 isoform X2

      UniProtKB/TrEMBL
      B7ZN43

    2. XM_006504945.5 → XP_006505008.1  testis-expressed protein 26 isoform X1

      UniProtKB/TrEMBL
      B7ZN43

    3. XM_036165588.1 → XP_036021481.1  testis-expressed protein 26 isoform X3

      UniProtKB/TrEMBL
      Q8C314

    RNA

    1. XR_001784754.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VB26.1 GenPept UniProtKB/Swiss-Prot:Q0VB26

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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