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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008637.1Â RefSeqGene
- Range
-
5019..13345
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001193644.1 → NP_001180573.1  peroxisomal biogenesis factor 19 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (4, also known as PxFpdelta8 or PEX19pdeltaE8) uses an alternate splice site that results in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (c) has a distinct and shorter C-terminus, compared to isoform a.
- Source sequence(s)
-
AB062286, AL513282, BC064979, CD557913, DC400252
- UniProtKB/TrEMBL
-
Q5QNY5
- Conserved Domains (1) summary
-
- pfam04614
Location:74 → 274
- Pex19; Pex19 protein family
-
NM_002857.4 → NP_002848.1  peroxisomal biogenesis factor 19 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as PxFall or PEX19all) represents the longest transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AL513282, BC064979, X75535
- Consensus CDS
-
CCDS1201.1
- UniProtKB/Swiss-Prot
- D3DVE7, E9PPB4, G3V3G9, P40855, Q5QNY4, Q8NI97
- UniProtKB/TrEMBL
-
A0A0S2Z497
- Related
- ENSP00000357051.5, ENST00000368072.10
- Conserved Domains (1) summary
-
- pfam04614
Location:74 → 299
- Pex19; Pex19 protein family
RNA
-
NR_036492.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as PxFdelta2 or PEX19deltaE2) lacks exon 2, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB062286, AL513282, BC064979, DC400252
- Related
-
ENST00000472750.5
-
NR_036493.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3, also known as PxFdelta4) lacks exon 4, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB062286, AL513282, BC064979, DC405033
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11Â Reference GRCh38.p14 Primary Assembly
- Range
-
160276807..160285151 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1Â Alternate T2T-CHM13v2.0
- Range
-
159413883..159422227 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001131039.1: Suppressed sequence
- Description
- NM_001131039.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.