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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001319960.2 → NP_001306889.1 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AI521228, AL096819, BC016464, BC144149, DA724785
- Consensus CDS
-
CCDS91128.1
- UniProtKB/TrEMBL
- A0A8I5KTR7, A0A8J8YX80
- Related
- ENSP00000356482.4, ENST00000367512.8
- Conserved Domains (2) summary
-
- cd02126
Location:664 → 789
- PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
- pfam01532
Location:59 → 498
- Glyco_hydro_47; Glycosyl hydrolase family 47
-
NM_025191.4 → NP_079467.3 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform 2 precursor
See identical proteins and their annotated locations for NP_079467.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AF288393, AI521228, AL096819, BC016464, DA724785
- Consensus CDS
-
CCDS1363.2
- UniProtKB/Swiss-Prot
- B2RCH6, B7ZLZ2, Q0VGM5, Q5TEZ0, Q7L2Y5, Q9BZQ6, Q9HCW1, Q9UFV7
- UniProtKB/TrEMBL
-
A0A8I5KTR7
- Related
- ENSP00000318147.7, ENST00000318130.13
- Conserved Domains (2) summary
-
- cd02126
Location:664 → 789
- PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
- pfam01532
Location:59 → 498
- Glyco_hydro_47; Glycosyl hydrolase family 47
RNA
-
NR_135118.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice junction compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI521228, AL096819, BC016464, BC144150, DA724785
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
184690237..184754858 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011510012.2 → XP_011508314.1 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KWI4
- Related
- ENSP00000509571.1, ENST00000687113.1
- Conserved Domains (2) summary
-
- cd02126
Location:588 → 713
- PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
- pfam01532
Location:1 → 421
- Glyco_hydro_47; Glycosyl hydrolase family 47
-
XM_005245499.3 → XP_005245556.1 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KTR7
- Conserved Domains (2) summary
-
- cd02126
Location:665 → 790
- PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
- pfam01532
Location:59 → 498
- Glyco_hydro_47; Glycosyl hydrolase family 47
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
184053426..184118046 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054338869.1 → XP_054194844.1 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KWI4
-
XM_054338868.1 → XP_054194843.1 ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KTR7