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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001270531.2 → NP_001257460.1 pre-mRNA-splicing regulator WTAP isoform 1
See identical proteins and their annotated locations for NP_001257460.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 and 4 both encode the same isoform (1).
- Source sequence(s)
-
AF374416, BC069192, BG702882, BX387163
- Consensus CDS
-
CCDS5266.1
- UniProtKB/Swiss-Prot
- Q15007, Q5TCL8, Q5TCL9, Q96T28, Q9BYJ7, Q9H4E2
- UniProtKB/TrEMBL
-
A8K489
- Related
- ENSP00000479438.1, ENST00000621533.5
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 222
- Wtap; WTAP/Mum2p family
-
NM_001270532.2 → NP_001257461.1 pre-mRNA-splicing regulator WTAP isoform 3
See identical proteins and their annotated locations for NP_001257461.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has an alternate 3' end sequence compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1. Variants 5 and 6 both encode the same isoform (3).
- Source sequence(s)
-
AA706250, BE906617, CN284477, D14661
- Consensus CDS
-
CCDS75542.1
- UniProtKB/TrEMBL
-
A0A087X1R4
- Related
- ENSP00000484404.1, ENST00000614346.4
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 150
- Wtap; WTAP/Mum2p family
-
NM_001270533.2 → NP_001257462.1 pre-mRNA-splicing regulator WTAP isoform 3
See identical proteins and their annotated locations for NP_001257462.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) has an alternate 5' and 3' end sequences compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1. Variants 5 and 6 both encode the same isoform (3).
- Source sequence(s)
-
AA706250, BG702882, BQ948913, D14661
- Consensus CDS
-
CCDS75542.1
- UniProtKB/TrEMBL
-
A0A087X1R4
- Related
- ENSP00000487338.1, ENST00000631126.2
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 150
- Wtap; WTAP/Mum2p family
-
NM_004906.5 → NP_004897.2 pre-mRNA-splicing regulator WTAP isoform 1
See identical proteins and their annotated locations for NP_004897.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Variants 1 and 4 both encode the same isoform (1).
- Source sequence(s)
-
AF374416, BC069192, BE906617
- Consensus CDS
-
CCDS5266.1
- UniProtKB/Swiss-Prot
- Q15007, Q5TCL8, Q5TCL9, Q96T28, Q9BYJ7, Q9H4E2
- UniProtKB/TrEMBL
-
A8K489
- Related
- ENSP00000351141.4, ENST00000358372.8
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 222
- Wtap; WTAP/Mum2p family
-
NM_152857.3 → NP_690596.1 pre-mRNA-splicing regulator WTAP isoform 2
See identical proteins and their annotated locations for NP_690596.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has alternate 5' and 3' end sequences compared to variant 1. Because of the frameshift and immediate translation termination, the resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1. Variants 2 and 3 both encode the same isoform (2).
- Source sequence(s)
-
AA706250, BG702882, D14661
- Consensus CDS
-
CCDS5267.1
- UniProtKB/Swiss-Prot
-
Q15007
- Related
- ENSP00000336911.4, ENST00000337387.4
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 150
- Wtap; WTAP/Mum2p family
-
NM_152858.3 → NP_690597.1 pre-mRNA-splicing regulator WTAP isoform 2
See identical proteins and their annotated locations for NP_690597.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has an alternate 3' end sequence compared to variant 1, that causes a frameshift and immediate translation termination. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1. Variants 2 and 3 both encode the same isoform (2).
- Source sequence(s)
-
AA706250, BE906617, D14661, DA561768
- Consensus CDS
-
CCDS5267.1
- UniProtKB/Swiss-Prot
-
Q15007
- Related
- ENSP00000497840.1, ENST00000650096.1
- Conserved Domains (1) summary
-
- pfam17098
Location:68 → 150
- Wtap; WTAP/Mum2p family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
159726693..159756319
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017011514.3 → XP_016867003.1 pre-mRNA-splicing regulator WTAP isoform X1
- UniProtKB/TrEMBL
-
A8K489
-
XM_017011516.3 → XP_016867005.1 pre-mRNA-splicing regulator WTAP isoform X4
-
XM_047419578.1 → XP_047275534.1 pre-mRNA-splicing regulator WTAP isoform X2
- UniProtKB/Swiss-Prot
- Q15007, Q5TCL8, Q5TCL9, Q96T28, Q9BYJ7, Q9H4E2
- UniProtKB/TrEMBL
-
A8K489
-
XM_017011515.2 → XP_016867004.1 pre-mRNA-splicing regulator WTAP isoform X3
- UniProtKB/TrEMBL
-
A8K489
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
160967457..161001943
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054356858.1 → XP_054212833.1 pre-mRNA-splicing regulator WTAP isoform X1
- UniProtKB/TrEMBL
-
A8K489
-
XM_054356861.1 → XP_054212836.1 pre-mRNA-splicing regulator WTAP isoform X4
-
XM_054356859.1 → XP_054212834.1 pre-mRNA-splicing regulator WTAP isoform X2
- UniProtKB/Swiss-Prot
- Q15007, Q5TCL8, Q5TCL9, Q96T28, Q9BYJ7, Q9H4E2
- UniProtKB/TrEMBL
-
A8K489
-
XM_054356860.1 → XP_054212835.1 pre-mRNA-splicing regulator WTAP isoform X3
- UniProtKB/TrEMBL
-
A8K489