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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001370093.1 → NP_001357022.1 lysine-specific demethylase 4B isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC005595, AC022517, AC053467, AC093033, AC104520
- Consensus CDS
-
CCDS92493.1
- Related
- ENSP00000371178.3, ENST00000381759.8
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
NM_001370094.1 → NP_001357023.1 lysine-specific demethylase 4B isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC005595, AC022517, AC053467, AC093033, AC104520
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
NM_001411148.1 → NP_001398077.1 lysine-specific demethylase 4B isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC005595, AC022517, AC053467, AC093033, AC104520, KC877698, KC877705
- Consensus CDS
-
CCDS92494.1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
-
NM_015015.3 → NP_055830.1 lysine-specific demethylase 4B isoform 1
See identical proteins and their annotated locations for NP_055830.1
Status: VALIDATED
- Source sequence(s)
-
AB020683, AF052144, BC015378, BF917212, DA379611, DB636535
- Consensus CDS
-
CCDS12138.1
- UniProtKB/Swiss-Prot
- B9EGN8, D6W631, O75274, O94953, Q6P3R5, Q9P1V1, Q9UF40
- UniProtKB/TrEMBL
-
A0A0C4DFL8
- Related
- ENSP00000159111.3, ENST00000159111.9
- Conserved Domains (5) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- smart00333
Location:921 → 973
- TUDOR; Tudor domain
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
- cd15576
Location:683 → 788
- PHD_JMJD2B; PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
- cd15714
Location:797 → 906
- ePHD_JMJD2B; Extended PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
4969113..5153598
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005259521.5 → XP_005259578.2 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
- Related
- ENSP00000480642.1, ENST00000611640.4
- Conserved Domains (5) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- smart00333
Location:955 → 1007
- TUDOR; Tudor domain
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
- cd15576
Location:717 → 822
- PHD_JMJD2B; PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
- cd15714
Location:831 → 940
- ePHD_JMJD2B; Extended PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
-
XM_011527814.3 → XP_011526116.1 lysine-specific demethylase 4B isoform X3
- UniProtKB/TrEMBL
-
B7ZM63
- Conserved Domains (4) summary
-
- smart00333
Location:863 → 915
- TUDOR; Tudor domain
- pfam02373
Location:84 → 200
- JmjC; JmjC domain, hydroxylase
- cd15576
Location:625 → 730
- PHD_JMJD2B; PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
- cd15714
Location:739 → 848
- ePHD_JMJD2B; Extended PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
-
XM_017026504.3 → XP_016881993.1 lysine-specific demethylase 4B isoform X5
-
XM_017026505.3 → XP_016881994.1 lysine-specific demethylase 4B isoform X6
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
XM_011527819.3 → XP_011526121.1 lysine-specific demethylase 4B isoform X6
See identical proteins and their annotated locations for XP_011526121.1
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
XM_011527820.3 → XP_011526122.1 lysine-specific demethylase 4B isoform X6
See identical proteins and their annotated locations for XP_011526122.1
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
XM_011527821.3 → XP_011526123.1 lysine-specific demethylase 4B isoform X6
See identical proteins and their annotated locations for XP_011526123.1
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
XM_011527822.3 → XP_011526124.1 lysine-specific demethylase 4B isoform X7
- Conserved Domains (2) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
-
XM_047438470.1 → XP_047294426.1 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
-
XM_017026503.2 → XP_016881992.1 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
- Conserved Domains (5) summary
-
- smart00545
Location:15 → 56
- JmjN; Small domain found in the jumonji family of transcription factors
- smart00333
Location:955 → 1007
- TUDOR; Tudor domain
- pfam02373
Location:176 → 292
- JmjC; JmjC domain, hydroxylase
- cd15576
Location:717 → 822
- PHD_JMJD2B; PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
- cd15714
Location:831 → 940
- ePHD_JMJD2B; Extended PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
-
XM_047438472.1 → XP_047294428.1 lysine-specific demethylase 4B isoform X2
- UniProtKB/Swiss-Prot
- B9EGN8, D6W631, O75274, O94953, Q6P3R5, Q9P1V1, Q9UF40
- UniProtKB/TrEMBL
-
A0A0C4DFL8
-
XM_011527817.3 → XP_011526119.1 lysine-specific demethylase 4B isoform X4
- UniProtKB/TrEMBL
-
B3KX69
- Conserved Domains (3) summary
-
- smart00333
Location:595 → 647
- TUDOR; Tudor domain
- cd15576
Location:357 → 462
- PHD_JMJD2B; PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
- cd15714
Location:471 → 580
- ePHD_JMJD2B; Extended PHD finger found in Jumonji domain-containing protein 2B (JMJD2B)
RNA
-
XR_007066691.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
4954509..5140176
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054320280.1 → XP_054176255.1 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
-
XM_054320286.1 → XP_054176261.1 lysine-specific demethylase 4B isoform X5
-
XM_054320284.1 → XP_054176259.1 lysine-specific demethylase 4B isoform X8
- UniProtKB/TrEMBL
-
B7ZM63
-
XM_054320287.1 → XP_054176262.1 lysine-specific demethylase 4B isoform X10
-
XM_054320288.1 → XP_054176263.1 lysine-specific demethylase 4B isoform X6
-
XM_054320289.1 → XP_054176264.1 lysine-specific demethylase 4B isoform X6
-
XM_054320290.1 → XP_054176265.1 lysine-specific demethylase 4B isoform X7
-
XM_054320281.1 → XP_054176256.1 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
-
XM_054320282.1 → XP_054176257.1 lysine-specific demethylase 4B isoform X1
- UniProtKB/TrEMBL
- B7ZM63, F5GX28
-
XM_054320283.1 → XP_054176258.1 lysine-specific demethylase 4B isoform X2
- UniProtKB/Swiss-Prot
- B9EGN8, D6W631, O75274, O94953, Q6P3R5, Q9P1V1, Q9UF40
- UniProtKB/TrEMBL
-
A0A0C4DFL8
-
XM_054320285.1 → XP_054176260.1 lysine-specific demethylase 4B isoform X9
- UniProtKB/TrEMBL
-
B3KX69
RNA
-
XR_008485126.1 RNA Sequence